KEGG   Acromyrmex echinatior (Panamanian leafcutter ant): 105153255
Entry
105153255         CDS       T03917                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
aec  Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec04140  Autophagy - animal
aec04142  Lysosome biogenesis
aec04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:aec00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    105153255
   04140 Autophagy - animal
    105153255
   04148 Efferocytosis
    105153255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aec04131]
    105153255
Membrane trafficking [BR:aec04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    105153255
SSDB
Motif
Pfam: TPR_Vps41 Beta-prop_Vps41 Clathrin WD40_CDC20-Fz Beta-prop_THOC3 zf_RING_Vps8_fungal WD40 WD40_Prp19 VPS18_solenoid_2nd WD40_WDHD1_1st TPR_7 Beta-prop_HPS5 Beta-prop_WDR5 Beta-prop_WDR3_1st zf-RING_Vps41 Beta-prop_IFT122_1st WDR55 Beta-prop_EML_2 zf-RING_5 Beta-prop_RIG_2nd TPR_2 Vps39_1 zf_RING_Vps8 VPS18_RING_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd TPR_YpiA ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd zf-RING_2
Other DBs
NCBI-GeneID: 105153255
NCBI-ProteinID: XP_011066285
LinkDB
Position
Unknown
AA seq 846 aa
MESTSSKDEQNNQEDSDSSEIDETEPRLKYVRIRNDLEHILQNDAASCIAVHPKFLCLGS
HWGMIHLLDHQGNNIKSKMLQAHTVAVNQISIDYNGDFIASCSDDGKVFIYGLYSTENNH
NMSMGRLVKSIAIDPNYKSGSGRRFITGDDKLILYEKTFLARMKPTVLCEAEGGVRSVAW
FGHFVAWASDTGVRVYDLDARCSLGLIKWSCTAEVSPEHYRCNLQWSDDKTLLIGWVDIV
RICHIRKRTMQEMVNRDLPEFVVDPVSTFQVDFYISGIAPLKNQLILLGCLKELDENGKN
QRPTLHVVEPKYQDFSVICANSLTLRGYKEYSCNDYHLDCLKEENRFFIVSPKDIVVARL
YDTDDRIEWLLSHGKFEQALEAVTTNNGKDCKRHTVLDVGRIYLDHLLACGRYDEAGKLC
LKVLGRNKKLWEEEVYKFARVHQLRSISSYLPRGDVILDPLIYEMVLYEYLKMDPDGFLQ
LVKEWSPNLYTVAAVVNGVLEHLLVHNQRQNVLLEALAILYIHDGKYDKALAMYLKLRHK
DVFQLIQKYQLYNSVYDMIEGLMDLDTERAIQFFLEKDRVPSDTVVQKLQHNHRYLYLYL
DALDKRDTKDSKGKYHGLLVRLYADYSRDKLLPLLRRSDNYPIQQALDICSQRRFYPEMV
YLLGRIGNTSEALALMTRELNDMESAIVFCQEHDDEELWNDLINYSLDKPAAITFLLQKI
GTYVDPRLMVQRIEPTLEIPGLKKALVKMICDYNLQVSVQEGCKKILSNDYFNLHERLVR
CHQNGIFVDDDQMCGACHRKIIVREPRNIVVFYCKHCFHEDCLPNFDLIENCVICNSQKE
ITPGRK
NT seq 2541 nt   +upstreamnt  +downstreamnt
atggaatctacgtctagtaaagatgaacagaataatcaggaagattcagattcttcagaa
atagatgagacagaacctagattaaaatatgttaggatacgtaatgatttggaacatatc
ctgcaaaatgatgcagctagctgcattgctgtacatccaaaatttctttgtctgggatca
cattggggaatgatccatcttttagaccatcaaggaaataatataaaatctaaaatgcta
caggcacacacagtagcagtcaatcagatatccatagactataatggagattttatcgcc
tcttgcagtgatgatggaaaggtttttatttatggactgtatagtacagaaaacaatcat
aatatgagcatgggtagactagtcaagagtatagcaattgacccaaattataaaagtggt
agtggcagaagatttattacaggcgatgacaagttaattctttatgaaaagacttttctg
gctaggatgaagccaacagtgctttgtgaagcagagggtggagtcagatctgttgcatgg
ttcggtcactttgttgcatgggcttctgatactggcgtgagagtctatgatcttgatgct
agatgttcattgggacttatcaagtggtcctgtactgcagaggtatcaccagaacactat
aggtgcaatttacagtggtcagacgacaagacactattgattgggtgggtagacattgtg
cgtatctgtcatattagaaaacgtactatgcaagaaatggtcaatcgagatttgcctgaa
tttgtagtagatccagtatcaacatttcaagtagatttttatatatccggtatagcacca
ttgaagaatcagttaatattattgggttgcctaaaggagctagatgaaaatggaaagaat
caacgcccaactttacatgtggttgaaccaaaatatcaagatttctcagtaatatgtgca
aattctcttaccttacgtggctacaaggaatacagctgcaatgattatcatttggactgt
ttaaaagaagaaaatagattttttattgttagtccaaaggatattgtagtggctagatta
tatgatacagacgacagaatcgaatggctattgagtcatggaaagtttgagcaagctttg
gaagctgtaacaacaaataatggcaaagattgtaagaggcatactgtattagatgttggg
cgtatttatttggatcacttattagcatgtggaagatacgatgaagctggaaaactttgt
ctcaaagttttaggacgaaataaaaaattatgggaggaagaggtttacaaatttgctaga
gtgcatcagttgcgttcaatttcgtcctacttgcctcggggtgacgttattctcgatcca
ttaatctatgaaatggtgctatatgaatatctaaaaatggatcctgacggttttttacaa
ttggtcaaggaatggtctccaaatttatatacagtggcagcagtagttaacggcgtattg
gaacatttactagttcacaatcaacgacagaacgtattattagaagcgttagccatttta
tatattcacgacggcaaatacgataaagcgcttgctatgtatttgaagctgcggcacaag
gatgttttccaattgatccaaaagtatcagttatataattcagtatacgatatgattgaa
ggtttgatggatctggacacagaacgtgccatacaattttttttagagaaagacagagtg
ccgtctgacacggttgtacaaaaattgcaacataatcatcgttatttatatttgtatcta
gatgcattagataagagagacacgaaggattcaaaaggcaagtaccatggtcttctggta
cgattgtatgccgattattcgagagacaagttattaccgcttttacgtcgctctgataat
tatccgatacaacaggctctggatatttgtagccaacgtcgattttatccagaaatggtg
tatctattaggcagaattggaaacacttcagaagccttggcgctcatgacaagagaactc
aacgacatggaaagtgcaattgtattttgtcaggaacatgacgatgaagagttgtggaat
gatctaattaattactcacttgacaaacctgcggctattacattccttcttcaaaaaatc
ggcacttacgttgatcctaggcttatggtgcaaagaatagaacctactttggaaattcca
ggcttaaagaaagcattggttaaaatgatatgcgactacaatctgcaggtgtctgtgcag
gaaggttgtaaaaaaatactgtctaacgattatttcaatctccacgagcgacttgttcgt
tgtcatcaaaacggcatatttgtcgatgatgatcaaatgtgtggagcttgccataggaaa
ataattgtaagagagccgcggaatatagttgtattttattgtaagcattgttttcacgaa
gattgtctacctaattttgatttaattgaaaattgtgtgatatgcaattcgcaaaaagaa
ataacacctggcagaaaatga

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