Acromyrmex echinatior (Panamanian leafcutter ant): 105153430
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Entry
105153430 CDS
T03917
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec04382
Cornified envelope formation
aec04512
ECM-receptor interaction
aec04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105153430
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105153430
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
105153430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aec04147
]
105153430
00536 Glycosaminoglycan binding proteins [BR:
aec00536
]
105153430
Exosome [BR:
aec04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
105153430
Glycosaminoglycan binding proteins [BR:
aec00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105153430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
105153430
NCBI-ProteinID:
XP_011066574
LinkDB
All DBs
Position
Unknown
AA seq
1845 aa
AA seq
DB search
MRPRAAVTSRIIGDANHGIPLVLRITCVLALLVHAATWIPIAEAVICRDSYKCNCKGIKG
QPGFPGIPGPQGPEGLPGDIGPDGPPGPKGEKGAAGEYGATGEKGYRGDDGIQGFMGVAG
LSGNPGVSGVMGPDGLDGCNGTDGRAGAPGIPGVFGPRGVPGPSGDYGFPGEPGDGGINS
VGAKGIRGNPGIDGLEGYQGQQGLTGDMGYPGDTGDFGLPGSPGLPGMQGERGDTVYGVN
GQLGEQGDRGEPGPPGKDEYKKNTEHSPVKGPQGAKGMKGFYGDRGRKGELGAKGPQGRP
GFLGIKGIKGEQGDDGPRGKQGVGGPPGPADEKGEKGAPGFAGLPGPDGDDGEPGEEGNR
GPPGRQGAEGELGQYIPELDEIIAGNIGIQGDLGPPGEPGETGTPGLPGKVGFIGPPGPP
GLPGNPGFAGVKGSSIKGEQGDDGLSGPVGPQGSSGLPGLPGIMGAKGFPGVTITGPPGP
DGNPGLPGLSGPPGDRGDPGPPGEKGFPGKGIRIRGPPGERGLPGTPGISGPDGWPGFTG
PKGTKGIRGDDCGVCVPGLPGEKGQRGESGLDGYPGTTGFSGLPGPRGLKGVLGKRGVPG
PAGLEGDNGRPGIAGVQGPKGEQGKIFFPPGESIVSPPGDFGEKGLPGPEGIRGLRGQPG
PIGDTGVPGPKGDKGEHGSPGLSGKDGLPGWDGIPGEKGEDASIPIEFLRGDPGYPGEEG
IKGIQGDKGNKGEPGVSAEYIADSQGDKGYKGDRGAPGENGFKGFEGRSGDEGLLGLPGE
PGSPGISLQGPIGLKGYPGMPGDQGLRGTSGSPGLQGPVGFPGRIGNKGERGEPGSNLTY
GEIGERGWYGPKGDFGDAGPQGLRGRTGEDGVKGIKGAKGAPGYEGLSGLEGAKGQHGDS
IQGDRGFPGQPGMPGMSGRIGDVGIRGPDGPSGFDGMKGLKGEIGFIGRRGDDGDIGPQG
YQGMHGAQGLPGAPGEKGDVGESGDSGSRGWPGVKGIDGASGSKGEVGDAGVPGFSGVPG
LPGFKGITGDAGPEGLSGIPGENSFSGPQGDVGEHGFMGELGPPGLAGFDGRPGLPGEPG
LATDGFNGLQGQKGEPGFDGYNGREGPKGEIGDMGPDGLKGEQGEQGFPGRSGAHGISGR
HGAKGERGLIGPPGFDGLKGKSGLDGDPGIMGRPGKYYNQLFYXQITIHFMSAPGPKGHV
GEPGLPSYAFAEKGDFGNRGHDGFSGVKGQPGEPGYIGVPGRKGQIGDRGYPGPDGFLGL
PGFPGLPGDQGPHGAPGLPGEFAEPGEPGRAGLDGMPGIPGRAGQKGAPGEYGPNGPKGI
SGDIGHSLRGPKGIVGEPGLRGFVGFPGAPGLEGFQGFLGAPGPKGFRGEPGISADSAKG
QPGEPGWRGLDGRTGLKGMRGDSGLSGIDGLPGQKGERGETGETGLPGLLGPEGPKGSKG
QPGINPFPPFPRRGLPGDIGVSGLPGFPGLQGMIGEPGKDGLPGRQGETGMIGIPGLQGP
DGKDGPPGYQGSRGPTGRQGKQGFPGAPGLPAPNGIGPRDRGFYFARHSQSEMIPVCPRN
TVKIWEGFSLLHIMGNGRAYAQDLGAAGSCVRKFSTMPFLFCNLNNVCDYANRNDYSYWL
STTEPMPMMMTPIPAPEVGRYLSRCSVCEAPTRVIAVHSQSMAIPECPGGWEEIWVGYSF
LMHRDAGADGGGQSLVSPGSCLEEFRVRPFIECRGLGSCNYFSTATSYWLATIHDDEMFR
KPLQQTLKADHTSRVSRCAVCLRRRVTEVLKPFTSNNERAPNNWGIIPPPRQLPPDYESS
RIPPNPWATHTRGRPYSNRRVPHHQRRRGRVRGRHWESAESLNNV
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccagggccgcggtgacgtcaagaatcatcggcgacgcgaatcacggaatcccg
cttgtcctgcgaatcacctgcgtccttgccctactggtgcacgccgccacgtggataccg
atcgccgaggctgtgatctgcagagactcgtacaaatgcaattgtaagggaataaaaggg
cagccaggatttcctggaatacctgggcctcaaggaccggaaggactcccaggtgatatc
ggacccgacggacctcccggacccaaaggcgagaaaggagcagcaggagaatatggagcc
accggagagaagggctaccgaggcgatgatggtatacaaggatttatgggagttgcagga
ctttccggtaatcctggtgtatccggtgtgatgggtccggatggactggacggatgcaac
ggaaccgacggtcgtgctggtgcacccggtatacccggagttttcgggcctcgtggtgta
ccaggtccctcgggcgattatggtttcccgggagagccgggtgatggaggtataaattcg
gtcggtgccaaaggaattcgcggtaatcccggtatcgatggtttggagggttatcaagga
cagcaggggctcaccggcgacatgggttatccaggagacacaggtgactttggtttacca
ggttcacctggcttgccaggtatgcaaggtgaacgcggtgacaccgtgtacggtgtgaac
ggtcaacttggcgaacaaggagacagaggagagcctggaccaccgggtaaagatgagtac
aagaagaatacggaacattcgcctgtgaaaggaccgcagggtgcaaaaggcatgaagggt
ttctatggtgatcgaggtcgcaagggagaattgggcgccaaaggtccacagggtcgacca
ggattcttgggtatcaaaggtataaaaggtgaacaaggtgatgatggaccaagaggtaag
caaggtgtcgggggtccgccaggtccggctgatgaaaaaggagagaagggagctccagga
tttgctggattgcctggtccggatggagatgatggagaaccaggggaagaaggaaatcga
ggtccacctggtagacaaggagctgaaggagaactcggacaatacatcccagaacttgat
gagataatcgccggaaatatcgggattcaaggcgatcttggtcccccaggcgaaccaggc
gaaacaggaacaccgggtttgccaggaaaggtcggtttcataggaccgccaggaccacca
ggacttccaggtaaccctggtttcgcaggagtgaaaggctcatctataaaaggagaacaa
ggagatgatggtttatcaggacctgtgggacctcaaggatcttccggattacccggctta
cccggaattatgggtgccaaaggatttccgggagtaacgataactggaccaccgggaccg
gacggcaatccaggtcttccaggattatcaggcccgcctggcgatcgaggtgatcctggt
cctccgggagaaaaaggttttcctggaaaaggaataagaattcgtggcccacctggagaa
cgtggtctacctggaacacctggtatttctggtcctgacggctggcctggctttaccggc
cctaagggtaccaaaggtattcgaggagatgactgcggcgtatgtgtcccaggtttgccc
ggtgagaaaggacaacgtggtgaatctggtttggatggatatcctggaactacgggattc
tctggactacccggtcctcgaggattaaagggagtactaggaaaacgaggtgtgccagga
ccagcggggcttgagggtgataatggaagacctggtattgcgggagttcaaggacctaaa
ggagaacaaggaaagatattcttcccaccaggtgagagtattgtaagtccaccgggtgac
ttcggtgagaaaggcttacctggccccgaaggaattagaggtctacgaggacaaccagga
cctattggcgacaccggtgtaccgggacctaaaggagataagggtgaacatggttctcct
ggattatcgggaaaagatggtttgccaggatgggatggtattcctggcgaaaaaggtgaa
gatgcttcgataccaatcgaattcttacgcggagatccgggatatccgggagaggaagga
atcaaaggaatacaaggagataagggtaataaaggagaacctggtgtgtctgcagaatat
atcgcagatagtcaaggtgacaagggctacaaaggtgatagaggagctcctggcgagaat
ggtttcaaaggtttcgaaggacgttctggcgatgaaggtctactaggattgcctggtgag
cctggctctccaggaatttcgcttcaaggtcctataggtttaaaaggataccccggaatg
ccaggagatcagggacttcgaggcacatcaggctcacctggattacaggggccagtaggt
tttccaggtcgcatcggcaataaaggtgaacgaggagaaccaggatcaaatttaacatat
ggcgaaattggagaacgcggatggtacggtccaaaaggtgattttggtgatgctggtcca
caaggattacgtggccgaacgggagaagatggtgtgaaaggtatcaagggtgctaaagga
gcacctggttacgaaggattgtctggacttgaaggagccaaaggtcaacatggagatagt
atacaaggtgaccgtggattcccgggtcaacctggaatgcctggaatgtccggaagaatc
ggagacgtcggtatccgtggccctgatggtccttctggttttgatggaatgaaaggtctg
aaaggggaaatcggttttatcggacgacgtggtgacgatggcgatataggacctcaagga
tatcaagggatgcatggtgcacaaggtctaccaggtgctccaggagaaaagggtgatgtc
ggtgagagcggcgattcgggatcacgcggttggcctggtgtcaagggtatagacggagca
tctggttctaaaggagaggtaggagacgccggagttcctggtttctcaggagtgccaggc
ttgcctggattcaaaggtatcactggtgatgctggtcccgaaggattatcgggaatccct
ggcgaaaattccttcagcggtcctcaaggtgacgtgggtgaacatggttttatgggggaa
cttggaccgcccggtctggctggattcgacggacgaccgggtttaccgggagaaccagga
ttagccactgacggtttcaatggtctacaaggacagaaaggtgaacctggattcgatgga
tacaatggtagagagggaccaaagggagaaattggtgatatgggtcctgatggattaaaa
ggcgaacaaggtgagcaaggcttcccaggaagatcaggcgcgcacggaatatctggacga
catggtgcgaaaggtgaaagaggcctgattggaccacctggattcgatggtttgaaagga
aaatcaggtctcgatggtgatccgggtataatgggtagaccaggtaaatattataatcaa
ctattttattaacaaattacaatacattttatgtcagctcctggaccgaaaggtcatgta
ggtgaacctggtttaccatcttacgcgttcgcagagaagggtgattttggtaatcgcggt
cacgatggtttctctggtgtgaaaggacaaccaggcgaaccaggatatattggcgtacct
ggtcgtaagggtcaaattggagacagaggatatccaggtcctgacggttttctaggatta
cctggtttccctggtctaccgggtgatcaaggacctcacggagctccaggattgcccggt
gaattcgctgaaccaggtgaacctggccgcgctggtcttgatggtatgcctggtattcca
ggacgtgcaggacaaaaaggagctcctggtgaatatggtccgaacggacctaagggaatc
tctggtgacataggtcacagccttcgtggtcctaaaggaatagtcggagagccaggtctg
cgaggattcgtcggcttcccaggtgcaccaggtttagaaggatttcaaggcttccttgga
gcaccaggaccgaaaggtttccgtggagaaccgggaatatctgcagacagcgctaaagga
caacctggagaacctggatggcgtggattagatggtcgaactggactgaagggaatgaga
ggtgactctggtttatctggtattgatggtttgccaggacagaaaggagaaagaggagaa
accggtgaaactggtcttcctgggctgcttggtcctgaaggaccaaagggatcgaaagga
caacctggcataaatccttttccgccattcccgagacgaggattgcccggtgacatagga
gtatccggattaccaggtttccctggactacagggaatgataggtgagcctggcaaggac
ggtctgccaggtcgacagggtgagacaggaatgattggaattcctggattgcaaggaccg
gatggtaaagatggacctcctggatatcaaggatctcgcggacctacgggacgacaagga
aaacaaggtttccccggtgcacctggattacctgcgccaaatggaattggtccaagagat
agaggattctattttgctcgtcactcacaatccgaaatgataccggtctgtccaagaaat
accgtaaagatctgggaaggattttcgttattgcatatcatgggtaatggacgagcttac
gcacaggatcttggcgctgctggtagttgcgtcaggaagttttccactatgcctttcctg
ttctgcaatctaaacaacgtgtgtgattatgccaatcgcaatgactacagttactggctc
agtacaaccgagcctatgccgatgatgatgacaccaataccggctccagaagttggtaga
tatttatcgagatgttcagtgtgcgaagcaccgactagggtaatagccgttcacagtcaa
tctatggcaatacccgagtgtccgggtggctgggaagaaatctgggttggatacagtttc
ctcatgcacagagatgcaggtgcagatggtggtggtcagtctctagtctcgcccggatcc
tgcttagaggaattccgtgtcagaccgtttattgaatgtcgtggccttggtagttgtaat
tatttctctacggcaacatcgtactggttagcgaccattcatgacgacgagatgttccgt
aaaccgctgcaacagacgctcaaagccgatcatacgtcccgagtgagtcgctgcgccgtg
tgcctccgccgaagggtcaccgaggttttaaagcctttcacatctaacaacgaacgagcc
cccaataattggggcattataccaccacctcgccaattaccgcctgactacgagtcctcc
aggataccgcctaatccgtgggctacccatactcgaggaagaccatattcgaacagacgt
gtaccccatcaccaacgcaggagaggtcgcgtacgcggcaggcactgggaatcggcagag
tctttaaacaacgtgtag
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integrated database retrieval system
