Acromyrmex echinatior (Panamanian leafcutter ant): 105154206
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Entry
105154206 CDS
T03917
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec04382
Cornified envelope formation
aec04512
ECM-receptor interaction
aec04518
Integrin signaling
aec04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105154206
04518 Integrin signaling
105154206
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105154206
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
105154206
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aec04147
]
105154206
00536 Glycosaminoglycan binding proteins [BR:
aec00536
]
105154206
Exosome [BR:
aec04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
105154206
Glycosaminoglycan binding proteins [BR:
aec00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105154206
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
105154206
NCBI-ProteinID:
XP_011067867
LinkDB
All DBs
Position
Unknown
AA seq
1877 aa
AA seq
DB search
MTRLGLRFVASAVCLAGIVSGQLNHTSWLNPRPVVPLERGDIGRPTNGSDDDYGSSPDFK
YLGKGFITDNEGYEDAERRNGSFTSGNYSPDERAYPPFFWNRNRSDPHGQSSSGRFPYDR
ASPGYDRYPDSGGTPGFGIDENRPGGYLDGHGDYDTYSGAGESERGGNSGDSYSSSYGGT
YGAGSADSYGRGSGSAYGGSRGSGQIYGGSRGSDDAYGGRGRGYGGYGAAGDDENYPSNY
QVVPMPGAPRNCTGSGCCAPKCFAEKGSRGPPGIIGPQGPKGQRGFPGAEGLLGSKGEKG
DPGPQGPHGVKGDRGKMGMPGFPGINGVPGVQGSPGSPGVPGRDGCNGTDGERGRDGVPG
EPGPRGLRGLLGPKGEKGQPAYAGAFPVGQKGEPGMDGVRGPPGPPGYQGERGLSGPKGE
RGPYGAPGILGPKGEKGNMGLGFEGLKGDKGQKGEPGPPGSTAPIMPFVGGPEIHGGPPG
EPGYKGDKGEMGPEGQKGEPGFIGDHGIPGGLGQKGEKGLPGAPGIRGRDGFSGPPGPPG
RKGDRGIDGLEGLSGRPGKKGEPGRDGTMGVPGLRGPPGPPGGGKGRPGPPGPKGPRGFP
GPTGPRGADGFPGDPGPRGPVGLQGGPGSNGIPGPEGLPGEKGAKGEPGLTGFPGGPGPR
GFDGPPGAVGPRGPPGDKGFSIMGPKGMDGTPGLDGEKGQKGERGYAGVRGRPGDSLDGI
PGAPGAPGEPGEAGAPGRDGVPGLSGASGEKGDIGGRCIDCIPGLRGAKGDRGFDGTPGL
TGPRGPPGERGFPGEAGVDGLPGTIGPPGSPGKDGIPGAPGPQGEPGIPATVTWSMLKLE
KGDKGARGEPGRQGPPGPEGPPGEKGRPGFEGFPGLKGTPGDRGFPGQDGVPGRPGTPGR
RGEKGLSVKGEPGESGRPGFSGQKGEPGLYGLKGEPGQCPPLDLMKGFKGDRGLTGDKGE
PGPPGRDGLPGDKGLHGLSGPPGTPGPIGAPGPVGPRGLPGPRGDKGNMGPMGFPGEPGR
EGPRGFPGAPAPKGEKGEPGISVKGSPGLTGPPGEKGEKGLPGPPGKEGPRGYQGLAGFT
GEKGDMGPPGINGLPGAPGAKGDTGPIGPPGPPGAAGIPGADGIKGEPGLPGEPGRGGLP
GFPGAKGDRGEPGIDGPKGYPGRRGLPGIAGRSGGPPGPSGRDGIDGAKGESGKPGIGRD
GLPGLKGESGVPGRDGLPGFQGQKGDTGVRGFPGIKGDYGPPGIPGEPGPPGIDGLPGEV
GEIGPQGVPGFSGIDGEMGPPGRPGLDGIKGDRGLQGVVGLPGIQGALGEKGDRGPPGPT
IQIKGEKGEPGIPGFSGEKGEKGNQGVIGLSGYDGEKGDRGLPGLEGSSGPHGAPGSKGE
QGPAGIPGVPGVTIKGEKGLPGLLGKHGRDGFPGRPGEKGEPGLPGLPGPKGDIGPYGPV
GPQGEKGDQGPPGLTGPPGRDGNSGLEGVPGSPGERGQKGEQGPPGVFGAPGQKGESGFP
GPNGLDGPQGEKGERGWDGVNGLPGPIGQKGDRGYPGTVGSMGAVGYEGEKGEKGEDCLE
PPMGPKGDRGYPGPAGSPGPQGEKGIPGPPGFPGIDGIKGAQGFIGPPGPPGLSGLPGPV
GATGLPGLQGPVGAPGLIGEPGAPCETTPDYLTGILLVKHSQSQSVPICEPGHIRLWEGY
SLLYTDGDERAHSQDLGYAGSCVRKFSTIPFLFCDVNNVCHYASRNDRSYWLSTNRPIPM
MPVEEAAIEEYISRCVVCEVPANVIAVHSQTISIPECPAGWTGLWIGYSFVMHTGAGSQG
GGQSLSSPGSCLEDFRATPFIECNGAKGHCHYYSNQYSFWMVTIEDGQQFRSPEKQTLKA
GNLRSRISRCQVCIKNT
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atgacccggttgggattgcgattcgtcgcatccgcagtctgcctggccgggattgttagt
gggcaattaaatcacacatcatggctgaatccacgaccggtcgtgccgctggaacgaggt
gatatcggaaggcctacaaacggtagcgatgatgactacggcagttcgccagatttcaaa
tatttaggcaaagggtttattacggacaacgaaggatacgaggatgcggaaaggcggaac
ggcagtttcacgtctggtaattacagtcctgacgaaagggcctatcctccattcttttgg
aacagaaacagaagcgatcctcacggtcaatcttcctcgggccgatttccttacgataga
gcatcgccgggctatgacaggtatcctgacagcggcggcacgccaggattcggaattgac
gaaaatcgaccaggcggttacctcgatggtcacggcgattacgatacatacagtggtgcc
ggtgaaagtgagcgaggaggaaattctggtgattcttatagtagtagttatggaggaact
tatggtgcgggaagtgcggattcctatggtcgtggaagcggaagtgcttatggtgggagt
cggggaagtggacaaatttatggcggcagtcgtggaagcgatgacgcttacggtggtcgt
ggccgcggttatgggggttacggtgccgctggagatgacgaaaattatccgagcaattac
caggtggtacccatgcctggagcaccgcgaaactgcaccggatcaggatgctgcgcgccc
aagtgtttcgccgagaagggatcgcggggaccaccaggaataatcggaccgcaaggacct
aagggacaacgcggatttccaggagcagaaggtcttctaggatccaaaggtgagaaggga
gatcctggtccacaaggtccacacggtgtgaaaggtgacagaggaaaaatgggtatgcct
ggttttcccggtataaacggtgtacctggagtacaaggatctccgggttcacctggagtt
cccggtcgtgatggttgtaacggaacggatggtgaacgtggtcgtgatggtgtacctgga
gaaccaggacctcgcggtcttcgaggtctactcggacctaaaggagaaaagggtcaacca
gcgtatgctggtgcttttccagtgggacaaaagggtgaacctggtatggacggtgtaaga
gggcctcccggtcctcctggttatcaaggagaacgcggtctatctggtccaaagggtgaa
cgaggcccttacggtgcccctggcatactaggtcctaaaggagaaaaaggaaacatgggt
cttggatttgaaggattaaagggagacaaaggtcaaaagggtgaaccaggacctccgggt
tcaactgcgcccatcatgccattcgtgggaggcccggaaatccacggaggtccacctgga
gaaccaggttataaaggagataaaggtgaaatgggaccagaaggacaaaaaggagaaccg
ggattcataggtgatcatggtatacctggaggattaggacaaaaaggagaaaagggtctt
ccaggagctccagggattcgtggtagagatggtttctctggacctcctggacctcctgga
cgaaaaggtgatcgaggtattgatggattggagggactttctggacgacccggcaaaaaa
ggagaacccggtcgagatggaacgatgggtgttccaggtttacgaggacctcctggacca
ccaggaggtggtaaaggaagacctggaccaccaggtccgaaaggaccacgtggttttcca
ggacctactgggccacgaggagcagatggtttcccaggagatccaggaccgagaggaccc
gtaggtttacaaggaggtcctggatcgaatggaattccaggtccagaaggtttgccagga
gaaaagggtgcaaagggtgagcctggcttgaccggattccccggaggtccaggaccacgt
ggatttgatggaccacccggagcagtgggacctcgaggaccgccaggagataaaggattc
tctataatgggaccgaaaggaatggatggaacgcctggcttagatggagagaagggtcaa
aaaggcgaacggggttacgcgggggtacgtggtcgaccaggagattctctagacggtatt
ccaggagcaccgggtgcacccggtgagccaggagaagccggagcaccaggaagggacggt
gtaccaggtctttctggagcgtctggagagaaaggagatatcggcggtcgttgtatagat
tgtataccgggattgcgaggcgctaaaggagatcgtggtttcgatggtacacccggactc
actggtcctcgaggaccacctggagaacgcggtttccctggagaagctggagtggatggt
ttgccaggcacaatcggacctccaggatcaccgggaaaagatggtatacccggtgctcca
ggacctcaaggagagcccggaatcccagcaaccgtgacatggagtatgcttaaattggaa
aagggtgataaaggagcgcgtggagagcctggtcgacaaggcccgccgggaccagaagga
cctccaggagaaaagggtagacctggattcgaaggttttccagggcttaaaggaacgcca
ggagatcgtggattccctggacaagatggtgttccaggaagaccgggaacgcctggacgt
aggggagagaaaggattaagtgtaaaaggtgaacctggagaatcaggtcgaccaggattt
tcaggacagaaaggagaacctggtttgtacggacttaagggtgaacctggtcaatgtcca
ccactcgatcttatgaaaggcttcaaaggtgatcgaggtttaactggtgacaaaggagaa
cctggaccacctggcagggatggattacctggtgataaaggattgcatggtttgtcgggt
ccacccggtacacctggcccaatcggtgctcctggacctgtgggtccaagaggtttacct
ggtccgcgtggtgataagggtaacatgggtcctatgggtttcccaggagaacctggtcga
gaaggacctaggggtttcccaggtgctccggctccgaagggtgaaaaaggagaacctgga
atatcagtcaaaggtagtcctggtctaacaggtcctccgggtgaaaagggagagaaaggt
cttcctggaccaccaggaaaagaaggtccacgcggttatcagggattagcaggctttact
ggcgaaaaaggagacatgggcccaccgggaataaatggtttgccaggagcacctggtgca
aaaggagatacaggtccaattggtccacctggtcctccaggtgctgctggtattccagga
gcggatgggatcaaaggtgagccagggttaccaggagaaccaggtagagggggtctccca
ggattcccgggagcaaaaggggatcgcggtgaaccaggtatcgatggaccaaaaggatat
cctggcagacgaggattgcctggtattgcaggtagatctggaggtcctccaggcccttca
ggacgagatggtattgatggagcgaagggcgaatctggaaaaccaggcattggcagggac
ggattgcctggattaaagggtgagtcgggtgtaccaggtcgggatggattaccaggattc
caaggtcaaaaaggtgatactggtgtaagaggattccctggaataaaaggcgactatggt
ccaccgggtatacctggagaacctggtccgcccggtatagacggacttcctggagaagtt
ggtgaaatcggaccacagggagtacctggtttttctggaattgatggcgagatgggccct
cctggccggcctggactcgatggtattaaaggagaccgcggtttacaaggagttgtcgga
ttgcctggtattcaaggagcactaggagaaaagggagatcgtggtccgccaggacctaca
atccagattaagggtgaaaagggtgagccaggtattcctggattttctggagaaaaagga
gagaaaggaaatcaaggtgtaataggtctgtctggttatgacggtgaaaaaggcgataga
ggtctacctggactcgaaggatcttctggacctcatggtgctcccggatctaaaggtgaa
caaggacctgctggtattcctggagttcctggagttacgataaagggcgagaaaggtttg
cctggtctgttaggtaagcacggtagagatggatttccaggacgacctggtgagaagggt
gagccaggattacctggtttgcctggaccaaaaggagatattggtccttatgggccagtt
ggacctcaaggtgaaaaaggtgatcaagggccaccaggtctgactggacctccaggacgc
gatggcaattcaggtctcgaaggtgtacctggatcacctggtgagagaggtcagaagggt
gagcagggaccgcctggagtattcggtgccccaggacaaaaaggagaatccggttttcca
ggaccaaatggattggacggacctcaaggagaaaaaggtgaaagaggttgggatggtgta
aatggtctacctggaccaattggtcaaaagggtgatagaggatatcctggtacagttgga
tcaatgggtgcggttggttacgaaggtgagaaaggtgaaaagggtgaagactgtctcgaa
ccgccaatgggacctaaaggagatcgcggatatcctggtccggccggatcacctggtcct
cagggagaaaaaggaattccaggtccgcccggtttccctggcatagatggtattaagggc
gcgcaaggttttattggtccaccgggacctcctggactatcaggattacccggacctgtt
ggcgcaactggtttaccgggtcttcaaggtcccgtcggtgcgccaggactcatcggcgag
cccggtgcaccttgcgaaacgacacctgattatctcaccggtatccttctggttaaacac
agccaaagtcaaagcgtaccgatttgcgaaccaggccacataagactctgggagggatac
agcttgctctacactgacggcgatgagagagcgcactctcaagacttaggttacgccggc
tcgtgtgtaagaaaattctcaacgatacccttcctgttctgcgacgtcaacaacgtctgc
cattacgctagtcgcaatgatcgttcttattggctatctaccaatagaccaattcccatg
atgcccgtcgaagaggcggcgatagaagaatatatctccagatgtgtggtatgcgaagtt
ccggccaatgtgatagcggtacacagtcaaacgataagcattccagaatgtccggcggga
tggaccggtctttggatcggttatagttttgtaatgcataccggtgcaggttcccagggc
ggcggccagtctctgtcgagtcctggttcttgcctggaggacttccgcgccacaccgttc
atcgagtgcaatggcgccaaaggacactgccattactattctaatcagtacagcttctgg
atggtgaccatagaagacggccagcagttcaggagccccgaaaaacagaccctaaaggcg
ggtaatcttagatcccgaataagtcgctgccaagtttgtataaagaatacataa
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integrated database retrieval system
