Acromyrmex echinatior (Panamanian leafcutter ant): 105154254
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Entry
105154254 CDS
T03917
Name
(RefSeq) nuclear pore complex protein DDB_G0274915 homolog
KO
K18716
nucleoporin NUP42
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105154254
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105154254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_4
Nucleoporin_FG
zf_CCCH_4
zf-CCCH
Auts2
Torus
Flu_PB2_1st
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
105154254
NCBI-ProteinID:
XP_011067932
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MVICKYYRQGNCRYGQYCQFEHINHFAGNTKTEDDIIILVAKEVLLAERGGQWLLSCFAP
LKERPCIPGMEDLSPEEVRWEIYNAQKNGIVEQAKLHFQQLCQDMKAKREVLKNPTRETM
TLLKKILGSGQKASQLSLVNNTSTNNVFGNTTYNVQNNNPFGGFVSSSNTSSIFGKSNNN
TAFGNTATFGNNLGGFGATTSGAGSIFGTTSTSTAFSGVQNSTSAFGTQQTNPIFGGSPQ
NVFGQNNVFGGTGQLGNASTTSLFNNPMTSQASTSLFGGPTTTTSNLFGGSSTGLQTNPV
FGVSTTSSSGSFNGGIFTQPKTQMHAFGGAPVFAGVTTNYANNSTGNSLFGGGQTFSAPT
NGIFGVSTAVATPGFGAAAATTTPAFCTPIVAATTPGFGASVATTAPAFDLNQQPSNNTF
GTTVSAPNVFGAQNTDTMSASNTPFGAPSAAISGPFVTTSSQQFDSTNTSSAPFAGTGFG
VAVASTNNTFGTTETSSNSLFVNAGTTFATSNGTIPNPSPFSASTFGSINTSSPFGSPAS
TTVTTTTPANPFAPRPQQGASPFGNVAQNQLNINVPPFGKSPFNTAITNIIDDSVYSVDG
ALTDDEKNMFLAEKFIIGKIPLKPPTKDIR
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggttatttgcaaatattatcgacaaggcaattgccgttacggtcaatattgtcaattc
gaacacataaatcatttcgcgggcaatactaaaaccgaggatgatatcattattctggtg
gcgaaggaagtacttcttgctgagagaggcggccagtggttgctgtcttgctttgcccca
ctcaaagaacgcccctgtatcccagggatggaggacttatctccagaggaagttcgatgg
gagatatataatgcacagaaaaatggcatagttgaacaagcgaaactacactttcaacaa
ttgtgtcaagacatgaaggcgaaaagggaggtgttgaaaaatcctacacgggaaacaatg
acgttgctgaaaaaaattttaggaagtggccaaaaagcttctcagctgagcttagttaat
aacacgtcgactaataacgtgttcggaaatacaacatacaacgtgcagaataataatcca
tttggtggattcgtctcctcgagcaatacatcgtcgatatttggaaagtccaataataat
acagcatttggcaatacggcgaccttcggaaataatctcggcggatttggtgctacgacg
agtggtgctggctccatttttggaacaacgagcacgtcgacagcattcagcggtgtacag
aacagcacatcagcatttggaacgcaacagacgaatccgattttcggcggatcacctcaa
aatgtattcggccaaaacaatgtatttggcgggacgggccaacttggcaacgcgtctacc
acctcgctgttcaataatccgatgacttcgcaggcgagcacttcgttgtttggtggaccg
acaactaccacctccaatttgtttggtggttcgtccaccggattacagacaaacccggtt
ttcggtgtctcgactacgtcatcatccggctccttcaacggcggaatattcactcagcca
aaaacgcaaatgcatgcattcggcggagcgccagttttcgcgggagtaactaccaactat
gccaataattccactggcaactcgttatttggcggcggtcaaacgtttagcgctcctaca
aacggtatcttcggcgtatccacggctgttgcaacgccaggttttggtgcggctgccgct
accactacgccagctttttgtacgcctattgttgccgcgacgacaccaggttttggtgca
tccgtcgctaccacggcgccagcctttgatttgaatcaacaacccagcaataataccttt
ggaacgactgtatccgctcctaatgtctttggtgcacagaataccgacaccatgtcggca
agcaacacaccgttcggtgcgccgtctgccgcgatcagcggcccgttcgtcaccactagc
tcgcaacaatttgattctacaaacacgagctcggcgccatttgcgggaacaggattcggc
gtggccgttgcgagtacaaataatacattcggtaccacagaaacctcttccaattcgtta
tttgtgaatgcgggaactaccttcgcaacctccaacggaaccattccaaatccatcaccg
ttctccgcatcgacattcggcagtatcaatacttcctctccgttcggttcacctgctagt
acaactgttacaacaactacacccgcaaatccatttgcaccacggccacaacaaggcgct
tcaccgttcggaaacgttgcgcaaaatcaattaaacatcaatgttcctccttttggaaaa
tcaccatttaacaccgctataactaacatcattgacgatagcgtttatagtgtggatggt
gcactaacggatgatgagaagaatatgttcttggctgaaaaatttatcatcggcaaaata
ccactcaaacctcctactaaagatataagatga
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