Acromyrmex echinatior (Panamanian leafcutter ant): 105154266
Help
Entry
105154266 CDS
T03917
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aec03036
]
105154266
Chromosome and associated proteins [BR:
aec03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
105154266
microRNA pathway
RISC loading complex
105154266
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
ResIII
Dicer_platform
DEAD
PAZ
Helicase_C
Dicer_dsRBD
Dicer_PBD
SWI2_SNF2
dsrm
Motif
Other DBs
NCBI-GeneID:
105154266
NCBI-ProteinID:
XP_011067950
LinkDB
All DBs
Position
Unknown
AA seq
1611 aa
AA seq
DB search
MEPKIISENEMFRPRAYQIDLYERAVQNNMILYLPTGAGKTYIAVMLLKHLSRDVRKPYQ
EGGKRSIFVVNTVALVEQQSTYIKRHTDLRCKGYSGDMMVDFWMEEEWITEIEEHEVLVM
TSQIFLNLLIHRYIILDRINLIVFDECHRAVANHPMRQIMQQFENCSNEEHPRVLAMSAT
LLNANIKADKIESTIRTLEVTFHAKIATVESTDSIQGYCTNPNEEIVKYSKYLVPEVINK
INDIIKTTNEVIKNIKLNFDDIYKESSEEMRPKSKSSKLMAILDDVGKISSQAGIYCGNK
SALLHLIQLESLRKYSDDQMTNILLDYLITQIMLMRKLFDNEMKGCIELDRLSNFSCNQI
QKLFEMLLKYYNNLGKEKFCSIIFVKERFMTQVIYHMLKTLSAHDRRYSFLQPDYVIGFQ
NNPYKNTREVSCIAKWNKEVLQRLKNGSSNCIVATDVVDEGIDIPMCTLIIRYDVPTDFR
AYVQSKGRARHNLSSYLILVENDDEDFLKKYHQYKDTEKKLKRILVGKNERPLPTQDDIV
NGLYSDFDIEPYTVKCDDVVKSRLTEFTAIDLINMYCAALLTSKFVYLVPIWKLDKDDSK
NMYRISLKLPNLSPLKDVIYGDFMRSIDGAKRSVAMKTCIQLHKLGALTDKLLPATNDEL
TKNLDFLFPNWINEDGHLSGTYKRKREHQLEYPIAFYGAYPQPLRSLYLHVFDCTSLYPV
TGYDNRRVIFYNLLNDKSGFGILSTKRLPKIPSFPIFMKDGELNVDVKSNHATIVLSQNN
IELLKRFNFLLFSEIIPVIKSFMIFDNDNLENSFVIVPLNDKQEINWEIVETYQDLERIT
PNIPFHFRTSDYELALVAPNYRYNAVYIVTRVCDDLTPESYFPNEDFDTYTHYYKEKHGL
IIENLQQSMLEVKPIPIKINYIKPRKLSEGPLKNKKTDDTVEDLQEHLVPELCYKINFPS
VYWLKATTLPSILHRICQILIAEDLRVTIARETKLGTLILKESSSLKIEESVERSNEEDY
TNGLELTDDSIEKTLSDETYSDPNLFDLDCNPFMRDQEPRDLYRNIDCIQMIDIQYYNQF
MSETCEEDESIKQNANKNIGHYIQRSIISSTPSLSVLTSSDKPSFSQGPNSIEIVHALTT
KLGSDMFNLERLETLGDSYLKFIVSLFLYHKFPTFNEGQLTALKGKMIGNRNLYYCGNKK
GIPGRIKNDAFVPMSNFIPPAYSVYHPLQKILMDELVAPNVLYEFLIPNMERFTGYISED
TLNMMKQTVSSWDKRDKQTGVEHYLGVQILSDKTVADSVEALIGVYLKNNHIKGAAKLLK
WFGILPDVKIDMLLGSISQNPVIGVGDPNYYMPWADTLESKIGYKFKNRAFLLQAFTHPS
YTANGITECYQRLEFLGDAILDFLITCYIYENDVNLSPGDLTDLRSALVNNITFACLSVR
HGLHTALLAYAPKLHEIIDCFVRFQEERDYVVNDELLYVLIEEDECNITEYVDVPKVLGD
LFESLIGAIYLDSGKNLTKVWEIIYSFMHKEIDEFSRNIPKQPIRVIYENTDICPKFLEA
TLIKGTGMIMVPLKITIAGKEKLFHGFGVNKKQAKCAAAKQALKRLQLEKY
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atggagccaaaaatcatttcggaaaacgaaatgtttagaccgcgagcatatcaaatagat
ctatatgaaagggcagtgcaaaacaacatgatactctatttgccaactggcgcaggaaaa
acatacatagctgttatgcttctgaagcatctaagtcgtgatgtacgcaaaccttatcaa
gaaggtggaaaacgtagtatattcgttgtaaacacagtagcgttggttgaacaacaatca
acgtacataaagaggcatacagatctaagatgcaaaggttatagtggagacatgatggtg
gatttttggatggaagaagaatggataactgaaatagaagaacatgaagttttagtaatg
acatcgcaaatcttcctgaatctgctcattcacagatatataatattagatagaataaat
ttaatcgtgtttgacgaatgtcacagagctgtagctaaccaccctatgagacaaattatg
caacaatttgaaaattgttccaacgaagagcatccacgtgttttagctatgtcggcaaca
ttgttgaacgctaatataaaagcagataaaatagaatctacgattaggactttagaagta
acatttcatgcgaagatagcaactgtagaatcaacagattctatccaaggttattgtaca
aatcctaatgaagaaatcgtcaaatattcgaaatatctagttccagaagtaataaataaa
attaatgatattatcaaaacaacaaacgaagttatcaaaaatataaaacttaattttgat
gatatatataaagaatccagtgaggaaatgcgacctaaatcaaaatcttctaagctaatg
gctattttggacgacgtaggaaagatttcatcacaagcaggcatatattgtggaaacaag
tctgctttgctacatttaatccagttagagagtttgagaaaatattccgacgaccaaatg
acaaacattcttctggattatctaattacgcaaataatgctaatgaggaaattgttcgat
aatgaaatgaaaggctgcatagaattagaccgattatccaacttttcatgtaatcaaatc
caaaaattatttgagatgttgttgaaatattataataacttaggcaaagaaaagttctgc
agcattatttttgtcaaggaaagatttatgacacaagtcatatatcatatgttaaaaaca
ctatctgcacacgatagaagatacagttttcttcaacccgattatgtaattggctttcaa
aataatccttataaaaatactagagaagtttcatgtattgcaaaatggaataaggaggtg
ttgcaaagattaaaaaatggttcgtcaaattgtatcgtagcgaccgatgtggtcgacgaa
ggtatcgatataccaatgtgcacgttgataatacgttatgacgtgccaacagattttaga
gcatatgttcaaagtaagggtcgggcacgccataacttgagtagttatttaattttagtg
gaaaatgatgatgaggattttctaaagaaatatcaccaatacaaagatacagaaaagaaa
ttaaaacggatcttggtgggaaaaaatgaacgtccattgcctacccaagatgatattgta
aatggtctgtatagtgattttgatatcgaaccgtatacagtaaaatgtgatgatgttgtg
aaaagtcgcctaacagagtttaccgcgattgacttgataaatatgtattgtgctgcttta
ctgacatcaaaatttgtttacttggttccgatttggaagttagataaggatgattctaaa
aatatgtataggatttctctcaaattaccaaatctatcaccattgaaagatgtaatttac
ggtgattttatgaggagtatagatggtgctaaacgatctgttgctatgaagacttgcata
caattacacaagctgggtgcattaaccgacaagctattacctgcaacgaatgatgaatta
acgaaaaatctggatttcttatttccaaattggataaatgaagacggtcatctgtctggt
acatataaaagaaagcgagaacatcagctagaatatccgatagcattttatggtgcatat
ccacagcctctacgatcactgtatcttcatgttttcgattgcacttctctatatcctgtg
acgggttatgacaacagacgcgtaatcttttataatttgcttaatgacaagagtggcttt
ggtattctttccacgaagaggttgccaaagataccctcatttccgattttcatgaaggat
ggtgaattaaatgttgatgtaaagtctaatcatgcaacgatagtgttaagtcaaaataac
attgaattgcttaagaggtttaatttcttattgtttagtgaaattattcctgttattaaa
agttttatgatttttgataatgacaatctcgaaaattctttcgtaattgttccattgaac
gacaagcaagagataaattgggagattgttgaaacatatcaagatttagaacgaattaca
ccgaatataccttttcactttaggactagtgattacgaattagcacttgttgctccaaat
tacagatacaatgcggtctatatagtcacacgagtctgtgacgatctcacacccgaatca
tattttcccaatgaagatttcgacacatacacacattattataaagaaaaacatggactg
attatagaaaatctgcaacaatctatgttagaagtgaagccaataccaattaaaattaat
tatataaaaccaaggaaattatccgaaggtccgctgaaaaataaaaaaactgatgacaca
gtggaagatcttcaggaacatctagttccggaattatgttacaagataaattttccatct
gtgtattggttaaaagcaactactttaccttccattcttcatagaatatgtcaaatctta
attgcggaagacttgagagtaactattgcaagagagactaaattaggaacgttaatattg
aaagaatcgtcttccttaaaaatagaagagagtgtcgagagatcgaatgaagaagattat
actaatggattggaattaacggatgattcaatcgaaaaaacgctatcagacgaaacgtat
tcagatccaaatttgttcgatttggattgtaaccccttcatgagagaccaagaacctcgg
gacttatatcgtaatatagactgtattcaaatgatcgatattcaatattacaatcagttt
atgtcagaaacctgtgaagaagatgagagcatcaagcaaaatgcgaataagaatattggt
cactacattcagaggtcaataatatcatctacaccatcgttgagtgttcttacatcgtct
gataagccttctttctcacaaggtcctaattcgattgaaattgtacatgcgctgaccact
aaattaggttcagatatgttcaacctggagcggttggaaactttaggcgattcctatcta
aagtttatcgtatcactatttttatatcacaaatttccgacatttaacgagggtcaattg
acggcgttgaaaggaaagatgattggcaatcggaatctttattattgcggcaataaaaaa
ggtattcccggacgtataaagaatgatgcatttgtgcccatgagcaattttatcccgcct
gcgtattcggtgtaccatccattgcaaaagatattaatggatgaattggtggcgccaaat
gtattatatgaatttctaataccaaacatggagagatttaccggatatataagcgaagat
acattaaatatgatgaaacagactgtatcaagttgggataagagagataagcaaactggc
gtcgaacattatctcggtgtacaaattttatctgataaaaccgtggcggattcggtggaa
gcgcttattggtgtttatctcaaaaataaccatataaaaggtgctgcaaagttgctcaag
tggtttggtatactacctgatgttaagattgacatgttactgggtagcatttcacagaat
cctgtaattggcgtgggtgatcccaactactatatgccatgggctgatactttagaaagc
aagattggttataaatttaaaaatcgagcatttttgctacaggcgttcacgcatccctcc
tacacagcaaatggaataactgaatgttatcaaagattagaatttctcggagatgctatt
cttgattttttgataacgtgttatatttacgaaaatgatgttaatttaagtcctggtgat
ctcaccgatctaagatcagcacttgtcaataatataacgtttgcttgcttgtcagtacga
catggtttgcataccgctttattggcctatgctccaaaattgcacgaaataattgattgc
tttgtaagattccaagaagaacgagattatgtggttaatgacgagttactgtacgtgtta
atcgaagaggacgaatgtaatataacagaatatgttgacgtccccaaagttctcggagat
ttattcgaatctttaattggtgccatttatcttgatagtggcaagaaccttacaaaagtg
tgggaaataatttattctttcatgcataaggaaatcgatgaatttagcagaaatattcct
aaacaaccaatacgagtgatatatgaaaatacagacatatgtcctaagtttctagaagca
acattgattaaaggcactggcatgattatggtacctttgaaaatcactattgctggtaaa
gagaaactcttccatggtttcggtgttaacaaaaaacaagctaagtgtgcagccgcaaaa
caagcattaaaaagactacaactcgaaaaatattag
DBGET
integrated database retrieval system
