Acromyrmex echinatior (Panamanian leafcutter ant): 105154280
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Entry
105154280 CDS
T03917
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105154280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aec03041
]
105154280
Spliceosome [BR:
aec03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
105154280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_Gbeta
EIF3I
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
PRP4
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_WDR41
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
WD40_RFWD3
Ge1_WD40
Beta-prop_HPS5
WD40_like
Motif
Other DBs
NCBI-GeneID:
105154280
NCBI-ProteinID:
XP_011067999
UniProt:
F4W7W5
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MSDDEDLVYVKKQKTVHYGSLEEAERARLAATIETTDEEKDVTNANDVTNVSASGGNVHI
SNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKHLRQLGEPICLFGEGPAD
RRTRLRELLASVGEDAIKKKHEEEEKPSYPLEKDAESTWYHEGPDSLQIARSWIASYSLP
RAKARLDKARQDLLLPAATRTAKRQELLKKLQALSIYCSQIGDNRPISFCQFSPNSKILV
TASWSGLCKLWSVPDCTLLRTLHGHNCNVGCIVFHPKATITEDVVGDNAVPTCVLASCAA
DGTVKLWSGGTGEEPLAEVEGHEPHRVSRIAFHPSGRFLGTCCYDASWRLWDLEQQAEVL
HQEGHARAVHCISFQCDGSVCATGGQDSFGRVWDLRTGRCIMFMEGHLTSIFGIDFSPNG
FHIATASEDNTCKIWDLRKRTCIYTIPAHTNLLSDVKYQKTEGQYLVTASYDNTAKIWSN
KTWQPLKMLPGHDGKVMSVDVSPDHKFIATSSYDRTFKLWAPE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgacgaggatttggtttacgtgaagaagcagaaaaccgtccactatggttcc
ttggaggaagcagaacgtgcacggcttgcagctacaatcgaaactacagatgaagaaaag
gatgtcacgaatgcaaacgatgtcactaatgtttccgcctcaggaggaaatgtacatatt
tcgaatgagtacatggagctcgaggatgaaatgtccaaagatcgacaggcattattggaa
gaatttgaacgtaggaaaaaggctagacaaattaatgtttctacagatgactccgaagta
aagaaacacttaagacaattgggtgagccaatttgtctctttggagaaggtccagcggat
agaaggacaagattaagagaattattagctagcgtgggagaggatgctattaaaaagaaa
cacgaagaagaagaaaaaccgtcctatccactcgaaaaagatgcagaatcaacttggtat
catgaaggaccagattctttacaaatcgcaagatcatggatagcatcttattcattgccc
agagctaaagcacggttggataaggcaaggcaagatctactgttaccagctgcaactcgc
acagcgaaaagacaagagcttttgaaaaagttgcaagcattgagcatttattgttctcaa
attggtgataacaggcccatttccttttgccagttcagccctaattcgaaaatccttgtt
acagcttcatggtcaggcttatgcaaattatggtctgtacctgactgtactttgttacgc
actttacatggacacaattgtaatgttggctgtattgtttttcatccaaaagctacaata
accgaagatgtagtaggtgataatgcagtaccaacttgcgtgctggcatcgtgtgcagca
gatggtactgtaaaactatggagcggtggtactggtgaagaaccattagcagaggtggaa
ggacatgaacctcacagagtttctaggattgcttttcatccatctggacgatttcttggc
acatgttgttacgatgcatcttggcgattatgggatttggaacaacaagcagaagtactt
catcaagaaggtcatgctagggcagtacactgcattagttttcaatgcgatggaagcgtt
tgtgccacaggcggtcaagactcttttggcagagtatgggatttacgtaccggcagatgc
ataatgtttatggagggtcatctaacatctatcttcggcatcgatttctcaccaaacggt
tttcacatagcaacagcaagtgaggataatacctgcaagatatgggacttgcgaaagcga
acttgcatatacacgataccagcacataccaatttgctgtccgacgtgaagtaccaaaaa
acagaaggacaatatttggttaccgcatcttatgataacacagccaaaatttggtccaac
aaaacatggcaacctcttaagatgttaccaggtcacgatggaaaagtcatgtccgttgat
gtatcgcccgatcataaatttattgcaactagttcgtatgatagaactttcaaattatgg
gcgccagaatga
DBGET
integrated database retrieval system
