Acromyrmex echinatior (Panamanian leafcutter ant): 105154293
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Entry
105154293 CDS
T03917
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin NUP188 homolog
KO
K14311
nuclear pore complex protein Nup188
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105154293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105154293
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105154293
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N
Motif
Other DBs
NCBI-GeneID:
105154293
NCBI-ProteinID:
XP_011068023
LinkDB
All DBs
Position
Unknown
AA seq
1912 aa
AA seq
DB search
MEVAPMGNLPCSKDLWSIISGTTCCCAKETVEEEIKNATVLLKEGLQFFKPYTDASLQSI
SKRDPPPLQQMFDLINKLAPLLNLDATITWDLVCNFVSYEYRNCAETFASQLSDLTSXKF
TLIKCLKLMIEYKDNKRHPHHKEFGKFLNEILMGNLLESIRKQIEALKFVNAPTRSQFCT
EDHLHQLYNSTLIEMRELLHILTVIVHDVHIPSYEFAKFYGSIGGEPRRLVSTKSHEDKE
AITKKIEELQYSQIALLLVTLDVDKHTSMDDWINDVRSNMQDIFEHKCVRESSPQDGPLL
LSWMLANYAIDPDNIDTLIRFRPFGIKAIQLDVFEYLRDLINCEMFQEETHYAEVVRSSV
YNLLSLMCVFMDEDRLSALNGIFDALAAVVKFPECATRFWAEQGDGLWSIYKVAKELYPY
KFEPLTKIAIGLASTIITSAKKIASELNNLQSLKIEVSRQRDYSKPLQPYKADCIIQENS
FTIASNCMCEKITVLSDEKEVVLFHTKANYWNALHHKMEQLFSQASRGITHITVNGDNLS
ENVRLGLKLLEALLAKDIEIPSSMVTPTELSFEIINRFSYPALPTNLYKIVAVCISISSK
LVLRYPEDILSRTRSGVYPKFNNWNQKPLYFAEAISFDGGLIASWLSGIETIEHTYPILC
AFLDTLYNYLIAKHSKEAMYTIEIPGMVFLLQAVLPKLDSWYFESNAERIDLWLKSMFCI
HRALDSTLPKDDIRNELQLVVVYSLLYLEPRHALLKLLRTGERTLHNKMISETNWINGKG
FKTIKSVELALSIVNRLLMFRKSLGLELGDRSPLEIALYSSPRVPNGLLIVPTIVNYLYV
WFSPSLQKMAVRLLKKFAEEFSMSLLVCMGMDGTSIRETFAFRLTLPTCAIEVKVAILEL
VAVCLEKQPGLTEALFNIMHQAERKRIFPRPADEFLTEGCSQFLDSYLERMYKEDDIVCD
KLYDSTMTVLRAMWYHRNEILVNFFRKREKFWSHLFAPLFKTLVTGAKGYSQLLDVITLE
LYKSPLLENNFSKSLKELLDKSKDHWKKLAMYVLDVPANNENEKEQHTKQDRLIEPLYEI
NLESWYHFIVMLTDDRTAKNYPINVTQAHLLTQLALDSLLERVKEPNDSSSGKIPMLLAS
LSLRCITSWKQMCVGDSRIFKTRLSQLTQEIAQTYRGFGKALRQTMISLLLGCVQLVKST
LAEDSASLEYLLAHSCTIAIYELEELKKAALQLEHRKQQFSVTLTTDEKDTQKKADCHSA
ETLRGIRESLPATLAISMVTQLLRSYVERNANFKHRLRASCVQLRQMIPELMVCVGYTLQ
KYPYLKFSTAALSLLGVISRSPYCSYPINDNDIAKLWLSLIPPADISNSMLDSLYDDSVN
GQWRCQDWWPLYTLGLEFLIGLVSSETHMMFVNHIVVFLNSHEHQLMVVSTLLRHTADLL
AADLIQSLVALIHATATQIYIWNAIQQSVRETLIKCMYLAYDSTVNLLLRPRILKFIIDG
ISVESAEELESCDSRLPSGELKLLVNKLIVINTTCALSFVHFSPKLNTLVDTIYTQDYWY
TPMAEMNFGPPQMSMSSGPRLTYGTIISSTQLFTQALHSRSQPVAASLPASSTSQPGRED
KTDSAKKEWERAAPENLRRMHTSKDLRRIIHAASGSTSRTSNIGREFLGYVSGLDVTVPL
LSSPRLVRRPYDPLICENTILSRATALATGRHVTKSSSSGAAGAPGNGSPIVARNHRFSD
PWFESMDENNTRLALEINLILILSQALEGVKSPRLALRDRQLIARETATELGVFFDFLEH
RGTPDIWQVKGSLIDADTRSSRTIQDTSDPTQINLPARLQKNSTIDKAPVCSPDHENFSM
EMNRTETQEKRLDDSVLTTGVFKTNVSSVQFLPLMGKLLKTVVESLDSTQFR
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagctccaatgggcaacttgccttgcagcaaagatttatggtctatcatatcc
ggtacaacatgctgttgtgctaaagaaactgtcgaagaagaaataaagaatgccactgtt
ttactcaaagaagggcttcaattttttaagccatatacagatgcatcattgcaaagcatt
tctaaaagagatccaccccctctacagcaaatgtttgatttgattaataaacttgctcca
ctccttaacttggatgccacaattacctgggatctggtatgcaatttcgtgtcgtacgaa
tatagaaattgcgcagagacctttgcatcacaactctcggatcttacttctnataagttt
actttgataaaatgccttaaacttatgattgaatataaagataacaaaagacatcctcat
cacaaagaatttggaaagtttcttaatgagattctgatgggaaatctgcttgaatctata
cgaaaacaaatagaagcattgaagtttgtgaatgctcctacacggtcgcaattctgtaca
gaagatcatttacatcaattatataatagtactttaattgaaatgcgcgagctacttcat
atattgactgtgattgtacatgatgtacatattcctagttacgaatttgccaagttttat
ggtagcataggtggagaacctagacgattagtcagtacaaaaagtcatgaagataaagaa
gctatcactaaaaagattgaagagctacagtacagtcaaatagcactattacttgtaaca
ttggatgtagacaaacatactagtatggatgactggataaatgatgtcagaagtaatatg
caagacatttttgaacataaatgtgttcgtgaaagttcaccacaagatggaccgttactc
ttatcgtggatgctagcaaattatgcgattgatccggacaatatagacacattaattcgt
ttcagaccgtttggcatcaaagctatacaacttgacgtatttgagtatctgcgagatttg
ataaactgtgaaatgtttcaagaagagacccattatgctgaagtcgtgcgaagcagcgtt
tacaatcttttatccttgatgtgcgtctttatggacgaagatcgattaagtgctttaaat
ggtattttcgatgccctggctgccgtagtaaagtttccagaatgcgcaactagattctgg
gctgaacaaggtgatggtttatggtcgatttataaagttgccaaagaactatatccttac
aaattcgaacctttaaccaagatagctattggtctggcatccacaataattacgagtgcc
aaaaagattgcgtcagagttgaataatctacaatctctgaaaatagaggtttctcgccaa
agagattatagtaaaccattgcagccatacaaagcggattgtataattcaagagaactca
tttactatagctagcaactgcatgtgcgagaaaattaccgtgttatctgatgagaaagaa
gtagtattatttcatacaaaggcgaattattggaacgctttgcatcataaaatggaacag
ttattttctcaagcaagtcgtggaattacacatatcacggtgaatggtgataatttatcg
gaaaatgttcgtctaggcctaaaattgttagaagcattattggctaaagatattgagata
ccatcgagcatggttactcctacagaactaagttttgaaattattaatcgattctcatat
ccagcactaccaacgaatctgtataaaatcgttgctgtatgcatcagcatttcatcaaaa
ttggttttgaggtatcccgaagatattctctcgcgaacgcgatccggtgtttatccaaaa
tttaataattggaatcaaaaaccgttatactttgcggaagcgatttccttcgatggtggt
ctcatcgcgtcgtggctatcaggaatagaaaccatcgaacatacgtatcccattctgtgc
gcgtttctagacacattgtacaattatctaatcgcgaagcacagtaaagaggctatgtac
actattgaaataccgggcatggtatttctgctacaagctgtattacccaagctggactcg
tggtattttgaatcaaacgcagaacgaattgatttatggctaaagagtatgttttgtatt
catcgagctctggattcaactttacctaaagatgatattcgcaacgaattacagcttgtt
gtagtatacagtctgctttatttagaaccgcgtcacgcactgctgaaattacttcgaaca
ggcgagcgcacgttacacaataaaatgatttcggagacaaattggatcaatggaaaagga
ttcaagactatcaaaagtgtagaactagctctgtcgatagtcaatcgattattaatgttc
agaaaatctctgggtctagaacttggtgacagatcgcctctcgaaattgctttgtactcc
tctccgagagtacctaacggacttcttatagtaccaacaattgttaattatctgtatgtt
tggtttagcccttcgttgcagaaaatggctgtaagattactgaagaaatttgcggaggaa
ttttccatgtctttgctcgtttgcatgggaatggacggaacatctatacgagaaaccttt
gcgtttcgattaactctaccaacatgcgcgattgaagtcaaagtcgctattttagaattg
gttgccgtatgtctggagaaacaacctggcttgacggaagctctcttcaacatcatgcat
caagcagaacgcaagagaatcttcccacgtccagccgacgaatttcttactgaaggttgt
agtcaatttttggattcatatttagaacgaatgtataaggaagacgatatcgtgtgtgat
aaattgtatgatagcacaatgacagtattgcgcgccatgtggtatcatagaaatgaaatc
cttgtcaatttctttcggaagcgagaaaaattttggagccatctattcgcgccgcttttt
aaaactttagtgacgggtgcgaagggctattctcaattgttagatgtaattacattggaa
ttgtacaaaagtccattattagagaataatttttcaaaaagtttaaaggaactgttggac
aaatctaaggatcattggaaaaaattagctatgtatgttctcgatgttcctgcaaacaac
gaaaacgagaaggaacagcatacaaagcaagatagactcatagaaccattgtatgaaatt
aatttagagtcttggtatcactttatcgttatgctcaccgatgatcgaacggcgaaaaat
tatccgattaatgtaacacaggcacatctgttaactcagttggccttggattctctattg
gagcgagtgaaggaacctaatgattccagtagtggcaagattccgatgttattggcttct
ttatctctgagatgtatcacctcttggaaacagatgtgcgtcggtgattcgaggattttt
aaaaccagactatcgcaactgacacaagagatagcacaaacttatcgcggttttggaaag
gccctacgacaaacaatgatatcattacttcttggatgcgtgcaactggtcaaaagtact
ttagccgaagattcggcaagcctggaatatcttttagcgcactcttgcacgatcgctatt
tatgaactagaggaattgaagaaagctgcccttcaattagaacatcgaaaacaacaattt
tctgtcactcttacgactgatgagaaagatacacagaagaaggctgattgtcacagcgca
gagacactccgtggaatacgagagagtctaccggcgacgttagctatcagcatggtgacg
caattgttacgatcatatgttgaacggaatgcaaatttcaagcatcgtctaagagctagt
tgtgtgcaacttcgtcagatgatacctgaattgatggtatgcgtcggttatactcttcag
aaatatccatatctgaagtttagtacagcagctctgagtttgttaggcgttatatcgcgt
tcaccgtattgttcatatcctattaacgataatgacatcgcgaaactctggctgagcttg
attccaccagcagatatctccaatagtatgctcgattcattatatgatgattcggtaaat
ggtcagtggcgttgccaagattggtggccattatacacactgggcttggaatttctgata
ggcctggtcagcagcgagacacacatgatgtttgtcaatcatatagttgttttcttaaat
tctcacgaacatcaattaatggtggtatccactttattgagacacactgccgatctgcta
gccgccgatctaattcaatcactggtcgctcttatacatgctacagccacgcaaatatac
atttggaatgcaattcaacaaagtgttcgcgaaactcttattaaatgtatgtatttggcg
tacgatagtacggtgaacctgctgctgagaccgcggatacttaaatttatcattgacggt
atcagcgtggagagtgccgaagagctcgagtcttgcgatagtcggttacccagtggtgaa
ctgaaactgctggtgaacaaactgattgtcataaatacaacctgcgcgttaagcttcgtt
cacttctcgcccaagttgaacactctagtggatacgatatatactcaggattactggtac
acgccaatggccgagatgaactttggacctccgcaaatgagcatgagctccggtccacgg
cttacttatggtacaataatcagctcgacacagctattcacccaagctcttcactctcgt
tcacagcccgttgctgcttcattacccgcgtcttcaacatcgcagcctggacgcgaagac
aaaacagattctgcgaagaaagaatgggaacgtgccgcaccagaaaatcttcgtcgcatg
catacgagtaaggatttacgacgaataattcacgcggcctctggttcaacttccagaacg
tctaacattggcagagagtttctaggatacgtcagtggtctagatgtcacggtgccatta
cttagcagtcctagactcgtgcgtcgaccatacgacccactgatatgtgaaaacactatt
ctttcaagagcaactgctttggcaactggtagacacgtaacgaagagtagtagcagtgga
gctgctggcgctccgggtaacggtagcccaatcgtagcaagaaatcacagatttagtgat
ccatggtttgaatccatggatgaaaacaatacacgattagcattggaaatcaatcttatc
ctgatattgtcacaggctctggaaggagtaaaaagccccaggctcgctttgcgagatcgt
cagctcatagcacgggagaccgctactgaactaggagttttcttcgattttctcgaacac
cgcggtactcccgatatctggcaagtaaagggttccctcatagatgcggatacaagaagt
tccaggacaattcaagatacgagtgatccgacacaaataaatttaccagcgagacttcaa
aagaacagtactattgacaaagcaccggtgtgctcgcccgaccacgaaaatttttcaatg
gagatgaaccgaactgaaacacaagagaaaagacttgacgatagtgtcctcactactggc
gttttcaaaacgaatgtcagcagtgtacaattcttaccattaatgggaaaattacttaag
acagttgttgagtcgttggactcgacacaatttcgataa
DBGET
integrated database retrieval system
