Acromyrmex echinatior (Panamanian leafcutter ant): 105154640
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Entry
105154640 CDS
T03917
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105154640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105154640
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105154640
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
APD1-4_M
Motif
Other DBs
NCBI-GeneID:
105154640
NCBI-ProteinID:
XP_011068605
UniProt:
F4W8X5
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All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MIETDKKGCRELLIQRMTLAVITSVILQLFVVCCVVLLTHLSTDYAHWLEETWTIVMSPR
MWTYIIVLTLVTFLQSFFCSKNYLHPPLYYKSRFAKLYMTLRIQSLFQRALYIVIGGIVV
WLQLSLKKGSYSSLTTDCSIVYGTCSMEEYYFLLFSGLWSGLYFSFKTGNFAEKYFQFPI
IAQSKFLQLRRRFYTMFPTLMISSMWSTLYFMAIYYFMGSYFREALLPISMQVEVKPLDT
VSRLLNLSLIWQLWLYQFIFMLITNNTNMLFEIYLTEWAPFKFGLSGAYTPDSSETTLID
VLSMDKIPIMQHLGYLDLVTLAQKEKMRRSILFTLSQPGGHPYNWNCVVQKSTKLLEKFS
LDLNAISIKSQDQSCYSTLTARVPPVQQSKYIYHMRKLVSDTAPISVSEDVREAPYSGSF
IQKFIKQKKDAFTAYLLSKPLINYIFGEQDDNKIRYALQNGQLVIWAAEAISSLTVFSLS
EDSYGIVQKDVPVIINTLLSVKQALDKLSKSAMLARKMQADDKLIREIFTSLRSAIKRSL
YRIVTNFEPYINDLSLELSIIEQLQGFLNYKE
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgattgagacggacaagaagggctgcagggagttactgatacagcggatgaccttggcc
gtcattacgagtgtaattttgcaattatttgtcgtctgttgcgtcgttctgctcacacat
ctcagcacggactatgcacattggcttgaggaaacttggaccattgtaatgtctccccga
atgtggacttatatcatcgttcttaccctggtgaccttcctgcagagttttttctgtagc
aagaattatctgcatcctccactgtactacaagagcagatttgccaagctgtatatgact
cttagaattcaaagcttatttcagcgagcattgtacattgttattggtggtatcgtggtc
tggttacaattgtcattgaagaaaggaagctatagctctttgactacagactgcagcatt
gtatatggaacatgttcaatggaagaatattactttctgttatttagcggtctatggagt
ggattgtatttctctttcaaaactggcaattttgctgagaaatatttccagtttcccatt
atagcgcaatccaaattccttcaattaagacgaagattttataccatgtttccaacattg
atgatttcctccatgtggtcgactttgtatttcatggctatttattatttcatgggatca
tatttccgtgaagcattgttgccaatttccatgcaggtggaggtcaaacctttagacact
gtgtctagattattaaatctatcactgatatggcaactgtggctctatcagtttatattt
atgttgattaccaataatacaaacatgctatttgaaatatatctgacagaatgggctcca
ttcaaatttggcttgagtggtgcatatactcctgatagttcagaaactacccttattgat
gtactatcaatggacaagatacctataatgcagcacttgggttatttagacctggttacc
ttagctcaaaaagagaaaatgagaaggagtatattgtttacgctcagtcaaccaggtggt
catccatacaattggaattgtgtagtgcaaaagagtacaaaacttcttgagaagttttca
ttggatctcaatgcgatatctataaaatctcaagatcaatcctgttatagtactttgaca
gcaagagttccaccagttcagcaaagcaaatatatatatcatatgcggaaattggtatca
gatacagcaccaatatcagtatcagaagatgtaagagaagcaccttacagcggttcattt
attcaaaaatttatcaaacagaaaaaagatgcttttacagcatatttgttgtctaagcca
cttatcaattacatttttggtgaacaagatgacaataaaattcgttatgctttacaaaat
ggacaactggtgatttgggcagccgaagctatttcatctttgaccgtcttttcgttaagc
gaagattcttatggtattgtacaaaaagatgtaccagtcatcatcaacactctgttatca
gtgaagcaggctctggacaaactgtcaaaatcagctatgcttgcaaggaaaatgcaagca
gatgataaattaattagggaaatttttacatctttacgaagtgcgataaaacgtagtcta
tatagaattgttacaaactttgaaccatatattaatgacttgtctcttgaactttcaata
atagaacaattgcagggctttcttaattacaaggaataa
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