Acromyrmex echinatior (Panamanian leafcutter ant): 105154648
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Entry
105154648 CDS
T03917
Name
(RefSeq) LOW QUALITY PROTEIN: fibril-forming collagen alpha chain-like
KO
K19719
collagen type II alpha
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105154648
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aec00536
]
105154648
Glycosaminoglycan binding proteins [BR:
aec00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105154648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
105154648
NCBI-ProteinID:
XP_011068616
LinkDB
All DBs
Position
Unknown
AA seq
1472 aa
AA seq
DB search
MRRRALELITGLLVVQLLLPLPDQVNAMKHRLRKQRSKPQEHQAQQSSNDYEYDYNYENY
DEYDEKNETTTILPSRAIPSDITQLPERSEITTEAFLRREKTPTDLPAPTTTHFYDHGRS
DEISSTSARDHSVLPTEILPGESNIYSSVAVPGPRGSPGRPGDDGRPGDSGYPGQPGTPG
IPGPPGPPGPVPDVSLYYQQLALSQANEDKGPSGAAASLPYIQAQVGPMGPRGPPGPPGS
PGPQGFQGTRGETGELGSPGPPGMPGPRGLPGLPGKDGISGEDGETGPSGSPGLVGQRGL
PGIPGLPGLKGHRGFPGLDGAKGEQGTSGEKGSMGSPGPMGPVGPMGPAGPRGERGREGS
SGPPGLRGLDGIAGLPGQPGVIGKPGSPGFPGNPGIKGDQGPQGPTGNQGLQGPRGESGR
PGQPGETGPQGPQGKDGIPGEKGATGAIGSVGVVGFPGAQGQPGTPGNPGIPGAKGAPGL
PGDRGLKGDTGVKGDAPGPPGNEGKRGKRGMRGPIGSVGPPGERGVPGERGFPGSDGPIG
PQGQPGDRGPAGTVGSKGATGDPGRPGPAGLQGARGLMGRPGASGKPGNPGERGIQGADG
KPGEQGLPGLQGLPGPIGTPGERGYSGERGKDGEPGNPGPPGPRGDTGKEGLPGVQGLPG
PSGSDGARGLPGPIGSRGFQGLPGAAGNPGVPGKDGEAGVQGHPGPPGMVGDRGDRGFPG
ERGLIGPPGPMGPRGETGTQGSDGLIGLPGLKGDKGSFGSPGLLGLPGARGLPGEPGQKG
ERGIIGPIGPEGPSGHIGERGPQGEVGPPGSPGEPAERGDPGPPGLIGEPGAPGNPGERG
PHGLQGSQGFPGPQGLIGLPGLKGDRGYPGLKGEQGNPGLPGSHGEIGVPGPIGITGAKG
IRGDPGVRGEPGLMGPPGIIGHVGPSGPPGNIGPSGAPGLPGVKGDAGDTGRPGNPGPIG
NPGLPGIDGIKGESGSPGSQGLTGFQGPQGPLGERGLPGLPGSPGPIGNRGLRGAPGEIG
QPGKTGAEGPPGPPGLSVGGRPGDKGPPGVPGAAGPSGPPGLSGPPGPTGPTGLTGERGP
KGETGPQGVEGPQGPRGKPGPAGLEGIKGDRGEEGQKGAKGHRGFTGLQGLSGSPGLVGE
KGIPGLPGFPGKDGEPGIRGNPGREGNPGPIGPVGNPGSRGPSGEEGRQGSPGLPGPPGP
PGPPGEVGFGYDAASLVAFIGQGQTKGPDPLGDEPPRIFSKDIPEKERRELLLKAYENLK
SSFQKLMKPDGEKNSPAKTCRDLFVAYPDKLSGEYWIDPNEGDIRDAILVYCDAEKRATC
ILPNPSRSPEITHITDQQETWLSEIDNGMKITYKADSNQISFLQLLSKHANQNITYHCKN
SVAYFDYEKKTYKRGLKLLAWNDVELTPRGNQRLRYEMIMDECRVYRNNWGKTVVSYETD
KPTRLPILDVALRDIGKPEQSFSIEIGPTCYD
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atgagacggcgggctttagagctgatcacgggacttctcgtggttcagctgttgttgcct
ttgccggatcaagtgaatgccatgaaacacagactaaggaaacaacgatccaaaccgcaa
gagcatcaggctcagcagtctagcaacgattatgaatatgattataactacgagaactac
gacgaatacgatgaaaagaacgaaactacaacaatattaccatcacgtgcaataccatca
gatatcacgcaacttccggagagatccgaaataacaacagaagcatttttgaggcgagaa
aaaacacctacagatttaccagctcctacgacaactcacttttatgatcatggtagatca
gatgagattagttccacatctgctcgagatcattcagttttacctacggagattttacca
ggtgaaagtaacatatatagttctgtggctgtaccaggaccacgaggttcacctggtcga
cctggagatgatggtcgtcctggcgattcaggatatcctggacaacctggtacacctggg
atcccagggccacctggacctccaggacctgtacctgatgtatctctttattatcaacaa
ttggctttgtctcaagcaaatgaagataaaggtccgtccggtgcagcggcgtcattgcct
tacattcaggcacaagtaggcccgatgggtccgcgaggtcctccaggtccacctggttct
cctggtcctcaaggttttcaaggtacacgaggtgaaaccggtgaattgggttctccaggt
cctcctggcatgccaggtcctaggggtttaccaggattgcctggaaaagacggtatcagt
ggagaagatggcgaaactggtccatcaggatcgcctggtcttgtgggacaacgtggcctt
ccaggaatacctgggcttccagggctaaaaggtcaccgtggttttccaggtttagatggt
gccaaaggtgagcaaggaacttctggtgaaaaaggatctatgggctcgcctggaccgatg
ggaccagtaggaccaatgggtccagctggacctcgcggtgaaagaggtagagaaggttcg
tcgggccctcctggattgagaggtcttgacggaattgctgggctgcctgggcaacccggt
gttataggcaaacctggctcaccaggttttccaggcaatcctggaattaaaggtgatcaa
ggaccgcaaggaccgacaggaaaccagggtttgcaaggcccacgaggcgaaagtggccgt
ccaggacaacctggcgaaactggtccacaaggtcctcaaggcaaagatggaattccgggt
gagaaaggagccactggagcaataggatccgttggtgtggtcgggtttccgggtgctcaa
ggtcaacctggaacaccgggtaatcctggtatccctggcgccaaaggagcacctggcctt
cctggtgatagagggttaaaaggagatactggagtgaaaggtgatgctccgggacctcct
gggaatgagggcaaaagaggcaaaaggggtatgcgtgggccaatcggttctgtaggacct
cctggagaacgtggcgtacctggagaacgtggttttcctggatcggatggtcctatcggg
cctcaagggcaacctggtgatcgtggtcctgcaggaactgttggatcaaaaggcgctact
ggagatcctggacgacccggaccggcaggattacagggtgcacgtggtttaatgggtagg
cccggagcctccggaaaaccaggtaatcctggggaacgtggaattcaaggtgcggatggc
aagcctggagaacagggattgcctggattgcagggtctaccaggaccaataggaacacca
ggggaaagaggatattctggagaacgtggaaaagatggtgagcctggcaatccaggcccg
cctggtccaagaggagatactggtaaagaaggacttccaggagtacagggtctaccaggt
ccatcaggaagcgacggcgcgcgaggtcttccgggacccattggttctagaggttttcaa
ggtcttccaggtgccgccggtaatccgggtgttccaggcaaggacggagaagcaggagta
caaggacatcccggtccgccaggaatggtcggcgatagaggcgatcgaggatttccggga
gaaagaggacttattggacctccaggacctatgggacctagaggagaaactggaacacaa
ggctctgatggtctcattggtttaccaggactcaaaggagacaaaggaagtttcggttca
ccgggattattaggacttcctggcgcgagaggactacccggagaacctggacaaaaagga
gaaaggggcataataggaccaatcggccccgaaggtccctcaggacatattggagagcgt
ggaccacaaggagaagttggacctcctggctctcctggagaaccagctgaacgaggtgat
ccaggtcctcctggtctcattggcgagcccggagctcctggtaatccaggagaaagagga
cctcatggattacagggctcgcaaggttttccaggcccacaagggttaatcggacttccg
ggtctgaaaggtgatcgtggatatccgggtttaaagggagaacaaggaaatccgggacta
cctggcagtcacggcgagatcggagtacctggacctattggaattactggtgctaaggga
atcagaggtgatcctggtgtacgaggtgaacccggtttaatgggcccacctggtattata
ggacatgttggaccatcaggaccaccaggaaatataggaccatctggtgctcctggattg
cctggtgtcaaaggtgatgcaggcgatactggacgtcctggaaatccaggaccaatcggt
aatcctggtctacctggaatcgatggaattaaaggcgaaagtggatctccaggctctcaa
ggactaacaggttttcaaggacctcaaggtccgcttggcgaaagaggtttaccgggccta
cctggttcccctggtcctatagggaatagagggttacgcggagctcccggtgaaatagga
caacctggaaaaacaggagcggaaggtccgcccggacctcctggattaagtgtaggaggc
cgaccaggtgataagggaccacctggagtacctggtgctgcaggaccatcgggtcctcct
ggattatctggaccacctgggcccaccggacccaccggacttactggggaacgtggtccg
aaaggtgaaacaggaccgcaaggtgtggaaggtccacagggaccacgaggaaaacccggc
ccagcaggtcttgaaggtataaaaggggatcgcggagaagagggacaaaaaggagctaaa
ggacatcggggatttactggtttacaaggattatccgggtctcctggtttagtaggagaa
aaaggtatacctggtctaccaggatttcctggtaaagacggagaaccaggtattagaggt
aatcctggacgagaaggcaatcctggtcctatcggacctgtgggaaatcctggatcaaga
ggtccatctggggaagaaggtcgccaaggatcaccgggtcttccaggacctcctggacca
cctggtcctcctggagaagtgggtttcggttacgatgcggcgtctttagtagcatttata
ggacaaggccaaaccaaaggaccagatccacttggagatgaaccaccaagaatatttagt
aaagatatccctgaaaaggaacgaagagaattacttttaaaagcgtatgaaaatttaaaa
tcgtcattccaaaaattgatgaaaccggatggtgaaaagaattcgcctgctaaaacttgt
cgagatctatttgttgcttatccggacaaattatctggcgagtattggattgatccaaat
gaaggagatattcgagacgcgatcttagtgtattgcgatgctgagaaacgtgcaacttgc
attttaccaaatccatcgcgttcaccagagatcactcacatcactgatcaacaggaaacc
tggttgagcgagatagataacggcatgaagattacatacaaggcagatagtaatcaaatc
agtttcttgcaattgctctcaaaacatgcgaatcaaaacatcacgtatcattgtaaaaat
agcgtggcttactttgattatgaaaagaaaacatacaaaagaggcttaaagcttttagct
tggaacgatgttgaattgacaccacgaggtaatcagcgtcttagatatgaaatgataatg
gatgaatgcagggtctatcgaaacaactggggtaaaactgttgtctcgtacgaaacggat
aaacctacaagacttcctatattagacgtggctctgcgagatatcggaaaacccgaacag
agtttttccattgagatcggtccaacttgttatgattaa
DBGET
integrated database retrieval system
