Arsenophonus endosymbiont of Aphis craccivora: E3U36_00695
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Entry
E3U36_00695 CDS
T07584
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
aed
Arsenophonus endosymbiont of Aphis craccivora
Pathway
aed03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
E3U36_00695 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aed03400
]
E3U36_00695 (sbcB)
Enzymes [BR:
aed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
E3U36_00695 (sbcB)
DNA repair and recombination proteins [BR:
aed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
E3U36_00695 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E3U36_00695 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E3U36_00695 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QLK88596
UniProt:
A0A7D6HEK8
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All DBs
Position
complement(141649..143076)
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AA seq
475 aa
AA seq
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MLANKQKSSFLFHDYETFGQHPALDRPAQFASIRTDSNFNIIEEPQIFYCAPADDYLPQP
QAVMITGITPQYAIAHGINEAEFARRIHVIFSIGNSCIVGYNNIRFDDEVTRHIFYRNFY
DPYAYSWQQGNSRWDLLDVLRACYALRPDGINWPSNDEGLPSFKLEHLTTANGIEHANAH
DAMADVFATIEMAKLVKQAQPRMFNYFFQLRNKNEIRQLIDIIAMTPLVHVSGILGAIRA
NTSLMAPLAWHPENRNAIIACDLAADISPLLTLDSDTLRQRLYTPKAELSGELAIPIKLI
HINKCPILAPANTLRAADAQRIALDLDVCLNNLAILRQHSEVRDKVIQLFTEPQPFPEAT
DVDTKLYSGFFGDNDRSTMAIIRQTLPQNLPALDLKFDDPRMKQLFFRYRARNYPAILTE
QEQLALLHHRRDRLTSEKITEYLQTIEQLFIEHQEDKEKCLQLKALVDYAKQIAS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
attttggccaataagcaaaaatcctcatttctgtttcacgattatgaaacatttgggcag
catcctgctctcgatcgacccgcacaatttgccagcatcagaaccgactcaaattttaat
attatcgaagagccacaaattttttactgtgcccctgccgatgactatctccctcaacct
caagccgtaatgatcacgggtattacgccccaatatgcaatagctcatggcataaatgaa
gctgaatttgctagacgtattcatgtaatctttagcataggcaatagttgtattgtcggt
tacaacaatattcgatttgatgatgaagtgactcgtcatattttttaccgtaatttttat
gatccttatgcttatagctggcagcaaggtaattcacgttgggatttactggatgtgtta
cgcgcttgctatgcgctacgacctgatggcattaactggcctagcaatgatgaaggacta
cctagtttcaaattagaacatctgaccactgcaaacggtattgagcatgcaaatgctcat
gatgcaatggccgacgtttttgctactatcgaaatggcaaaattagttaagcaagcacag
ccaaggatgttcaattacttctttcaattaagaaataaaaatgaaattcgccaattgatt
gatattattgccatgaccccgttagtgcatgtttctggcattttgggcgcaatacgagct
aataccagtctaatggcaccactggcctggcatcccgaaaaccgtaatgccattattgcc
tgtgatctagcggcagacattagcccactgttaacattagatagtgatactctaaggcaa
cgtttatacacacccaaagcagagttatccggtgaattagccattcctattaaactgata
catattaataaatgtccaattctggctccggccaacacactgcgggcagcagatgcacaa
cgtatagcactagatctcgatgtctgtctgaataacttagccatattgcgacaacatagt
gaagtgcgggataaagttattcagctttttaccgaaccgcaaccctttcctgaagcaact
gatgtagatactaagctttattccggtttttttggtgataatgatcgttcaacaatggct
attatccgtcaaactttaccgcaaaatttacccgcattggatcttaaatttgacgatccg
cgcatgaagcaactattttttcgttaccgtgccaggaactatccggccatattgacagaa
caagaacagcttgccttgttacatcaccgacgcgatagattgaccagcgagaaaataacc
gaatatttgcaaactatcgagcaattatttattgaacatcaagaagataaagaaaagtgc
ctgcaactaaaagcactggtagattatgccaaacagatagccagttaa
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