Arsenophonus endosymbiont of Aphis craccivora: E3U36_00805
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Entry
E3U36_00805 CDS
T07584
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
aed
Arsenophonus endosymbiont of Aphis craccivora
Brite
KEGG Orthology (KO) [BR:
aed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aed03009
]
E3U36_00805 (srmB)
Enzymes [BR:
aed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E3U36_00805 (srmB)
Ribosome biogenesis [BR:
aed03009
]
Prokaryotic type
rRNA helicases
E3U36_00805 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
DUF4681
CMS1
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QLK88600
UniProt:
A0A7D6HS81
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All DBs
Position
162298..163626
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AA seq
442 aa
AA seq
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MTATTFSELELDQSLLNALDDKGYDRPTAIQLTTIPAAMEGRDILGSSPTGTGKTAAYLL
PVIQHLLDFPRKRSGPPRILILAPTRELAMQVAEQAKELAKYTHLDIATITGGVSYINHA
EIFSENQDIVVATTGRLLQYIKEENFDCRAIETLILDEADRMLDMRFANDIETIAGETRW
RKQTMLFSATLAGDVIHDFANRLLNNPYEIDADPSRRERKKIQQYYYRADNLEHKTALLC
HLLKQPDATKSIIFVRKRERAHELVQWLQQSKIKTWLLEGEMVQAKRTEAVKRLNSGQIN
VLVATDVASRGLDIDDISHVFNFDLPHTADVYLHRIGRTARAGRKGIAISLVEAHDQPLL
GKINRYLKEPLKIRVINSLRPTTKAPAEGSLRKPKPSKKIQLKRQEKKKIDQQKKKKTKE
RHRDSKNIGKRRRPSVKQTDNK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgccaccacattttctgaacttgagttagaccaaagtcttctcaatgcactggat
gataaaggctatgaccgcccgacagccattcagcttacaactatccctgccgctatggaa
ggacgcgatattttaggttcatcgcctacaggaacaggaaaaactgccgcttacttactg
ccggtgatccaacatttacttgattttccacgtaaacgatctgggccaccgcgtattctc
atattagcgccaacccgtgaactggcaatgcaagtagctgaacaagcaaaagaattagcc
aaatacacccatcttgatatcgcaaccattactggcggggtatcttatattaaccacgct
gaaatttttagtgaaaaccaagatattgtggtcgcaaccacaggccgcttactacagtat
attaaagaagaaaattttgattgtcgggcgatcgaaacgttaattttagatgaagctgat
cgaatgcttgatatgcgatttgccaacgacattgaaaccattgccggtgaaacacgctgg
cgcaaacaaactatgctattttcagcaacactagcgggtgatgtcattcacgattttgct
aatcgattactaaataatccttatgaaattgatgctgatccttcaaggcgtgaacgaaaa
aagatccaacaatactattatcgcgctgataacctcgaacataaaactgcgctactttgc
catctgttaaaacaacctgatgctactaaatctattatctttgtccgtaaacgcgaaaga
gcacatgagttagttcaatggttacagcaatccaaaataaaaacctggttacttgaagga
gaaatggttcaagcaaaacggactgaagcggttaaacgcctaaatagtgggcaaattaac
gtcttagtcgcgaccgatgttgcctcacgtggccttgatattgacgatattagtcacgta
ttcaatttcgacttaccgcatactgctgatgtttatctgcatcgaattggtagaaccgca
cgcgcgggacgaaaaggaattgcaattagcttagtagaagcccatgatcaaccgctatta
ggtaaaatcaaccgttatcttaaagaaccattaaaaatacgcgtcatcaatagccttcgg
cctaccaccaaagcgccggctgaaggttcactacgtaaacccaaaccgtcgaaaaaaatc
cagctaaaacgacaagaaaagaaaaaaattgaccaacaaaaaaagaaaaaaaccaaagaa
cgccatcgcgacagtaaaaatattggcaaacgtcgtcgaccatcagtaaagcaaactgat
aacaaataa
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