Arsenophonus endosymbiont of Aphis craccivora: E3U36_04130
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Entry
E3U36_04130 CDS
T07584
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
aed
Arsenophonus endosymbiont of Aphis craccivora
Pathway
aed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E3U36_04130 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aed03019
]
E3U36_04130 (rhlB)
Enzymes [BR:
aed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E3U36_04130 (rhlB)
Messenger RNA biogenesis [BR:
aed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E3U36_04130 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC138_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QLK87536
UniProt:
A0A7D6HD73
LinkDB
All DBs
Position
complement(785477..786763)
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AA seq
428 aa
AA seq
DB search
MSKTHLTDKKFIDFALHPKVIEALNKNGFHNCTPIQASTLSFTVEGRDVAGQAQTGTGKT
LAFLTSTFHYLLTHPTNSERQVNQPRALIMAPTRELAVQIYTDAKELAAITGLKMGLAYG
GDGYDEQLHVLQSGVDILIGTTGRLIDYTKQGHVHLGLIQVVVLDEADRMYDLGFIKDIS
WLFRRMPPATQRLNLLFSATLSYRVQELAFEQMNQPAYIEVEPQQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPERCIIFANTKHRCEDIWAHLAADGHRVGLLTGDVAQKKRLHILE
QFTQGHLDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLA
CEEYSLNLPAIEEYIQHQIPVSKYNSEALLQDLPTPKPRRRSRTNGTRRNNNSQSRQNNS
RNNRKRPS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacacatttgacagacaagaagtttatagacttcgccttacaccctaaagtt
attgaagcccttaataaaaatggctttcataactgtacgccgatacaagcgtcaacattg
tcttttactgtcgaaggccgtgatgttgcggggcaggcacaaacaggaacgggtaagaca
ttggcttttcttacctcaacatttcattatttactaacacatccaacaaattcagaacga
caggttaaccaacccagagcgctaattatggctcctacacgagaattagcggttcagata
tatactgatgcaaaagaattagccgctataacgggcttaaaaatgggtttagcttatggt
ggtgatggctacgacgaacaactgcatgtgctccagtcgggtgtagatattcttatcggt
acgaccgggcgtttaatcgattataccaaacaaggccacgttcatttaggtctcattcaa
gtggttgtacttgatgaagctgaccgtatgtatgatcttggttttattaaagatattagt
tggctatttcgtcgaatgccacccgccactcaacgcttgaatttactattttccgcaaca
ctttcttatcgtgttcaagaactggcatttgaacaaatgaatcaacccgcatatattgag
gtagaacctcaacaaaaaacaggtcatcgcattaaagaagaacttttctatccttctaac
gaagaaaaaatgcgtctgttacaaacgttaatcgaggaagagtggcccgaaagatgtata
atttttgctaataccaaacatcgctgtgaagatatctgggctcatcttgctgctgatggt
caccgcgttggcttattaactggcgatgtagcacaaaaaaaacggctacacattcttgaa
cagtttactcaaggccatttagatatcttagttgcaacagatgttgccgccagaggttta
catatcccatctgtcactcatgtatttaattatgatctacctgatgattgtgaagattat
gttcatcgtattggtcgtaccggccgcgccggtgagagtggtcattcaattagtctggct
tgtgaagagtattctttaaatctacctgctattgaggagtatattcagcatcaaatccct
gtcagcaaatacaacagtgaagcattattacaagatttacctacaccaaaaccacgtcgt
cgttcacgtactaatggaacacgtcgtaacaataatagccaaagccgacagaataattca
cgcaacaatcgtaaacgtccgagctaa
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