Arsenophonus endosymbiont of Aphis craccivora: E3U36_05140
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Entry
E3U36_05140 CDS
T07584
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aed
Arsenophonus endosymbiont of Aphis craccivora
Pathway
aed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E3U36_05140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aed03019
]
E3U36_05140
03009 Ribosome biogenesis [BR:
aed03009
]
E3U36_05140
Enzymes [BR:
aed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E3U36_05140
Messenger RNA biogenesis [BR:
aed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E3U36_05140
Ribosome biogenesis [BR:
aed03009
]
Prokaryotic type
rRNA helicases
E3U36_05140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
AAA_22
DRTGG
Motif
Other DBs
NCBI-ProteinID:
QLK87677
UniProt:
A0A7D6HF66
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All DBs
Position
974059..975888
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AA seq
609 aa
AA seq
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MTNETEISFADLGLSTPILSALNDLGYEKPSPIQQQCIPYLLDGCDVLGMAQTGSGKTAA
FSLPLLHNIDITLKAPQILVLAPTRELAVQVAEAMGEFSKHMRSVNVVALYGGQRYDSQL
RALRQGPQIVVGTPGRLLDHLKRGTLNLSHLRGLVLDEADEMLRMGFIEDVENIMSQIPT
EHQTALFSATMPEAIRRITRRFMKSPKEISIQSSVTTRPDITQSYWSVYGMRKNEALVRF
LEAEDFDAAIIFVRTKNATLEVAEALERSGYNSSALNGDMNQALREQTLERLKDGRLDIL
IATDVAARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRAILFVDNRERRLLRN
IERTMKQPIAEVELPSSTLLSERRQAKFAENIQKQLESGDLEKYRALLAKLVVDDDLDME
TLASALLKMAQGDRPLILPPDPVRRAKREFNSRDERRRSNGTSERSPRRERRDVGDMELY
RIEVGRDDGVEVRHIVGAIANEADISSRYIGNIKLFASHSTIELPKGMPNELLNHLTRTR
ILNKPMQMQLLGEAQPFERRGNGVQRNGGELRERGRRFGNERRSEREQFSGRNEGNNNAG
LRRRSNHNI
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgactaatgagactgaaatctcttttgctgatttaggtttatcaacaccgattctttct
gcactaaatgaccttggttatgaaaaaccatcgccaatccagcagcaatgtatcccctat
ttattagatgggtgtgacgtattaggtatggcacaaaccggtagtggtaaaaccgccgct
tttagtttaccgctattacataatatagatatcacattgaaagcccctcaaatcttagtg
ttggcaccaacgcgtgagttagccgtacaagttgcggaagccatgggtgaattctccaaa
cacatgcgttcagtaaatgtagtcgcactttatggtgggcagcgttacgattcgcaacta
cgcgcactaaggcaaggcccacaaattgtagtaggaactcctggtcgcttattagatcac
ttgaaacgagggacgctaaatttatcccatttacgtggcttggttcttgatgaagcggac
gaaatgttacgtatggggttcattgaagacgttgaaaatatcatgagtcaaatcccaacc
gagcatcaaacggcactattttctgccacaatgccggaagcgatccgtcgtattactcgt
cgttttatgaaatcaccaaaagagatcagcattcaatccagtgtgacgacgcgtccagac
attacccaaagttattggtctgtctatggcatgcgtaaaaatgaagcattagttcgtttt
ttggaggctgaagattttgatgcggcaattatttttgtacgcactaaaaatgccacatta
gaggttgctgaagcgcttgaacgtagtggctataatagctcggctctaaatggcgatatg
aatcaagctctacgtgagcaaactttagagcgtttgaaagatggccgtcttgatatatta
attgccaccgatgtcgcagcacgcggtctagatgttgaacgtattagtttagttgttaat
tatgacataccgatggatgcagaatcttatgtgcatcgaattggtcgtaccggtcgagca
ggtcgtgctgggcgtgctattttgtttgtcgataatcgtgaacgtcgactactacgcaat
attgaacgtaccatgaagcagccaattgccgaagttgagttaccaagttctacgctgtta
agtgaacgtcgccaagctaaatttgctgaaaatattcaaaagcaattagaaagcggtgat
ttagaaaaatatcgtgcattactggctaaattagttgttgatgatgatctggatatggaa
accttagcttccgcactattaaaaatggcgcaaggtgatcggccgctaatattgccacct
gatcctgttcgtcgtgcaaaacgtgaatttaattcacgtgatgagcgtcgtcgcagtaac
ggcacttctgaacgtagtccgcgtcgcgagcgtcgtgatgtcggtgatatggaattgtac
cgtattgaagttggtcgtgatgatggcgttgaagttcgccacattgtcggtgcaattgct
aacgaagcagatattagtagtcgttatattggtaatattaaattgtttgcttcacactca
acaatagagttaccaaaaggtatgccaaatgaattacttaatcatttgacacgtacacgt
attttgaataagccaatgcaaatgcaattgttaggtgaagcacaaccgtttgaacgtcgt
ggtaacggtgtgcagcgtaatggtggtgaattacgtgagcgaggacgtcgctttggtaat
gaacgtcgtagtgagcgtgaacagttcagtggtcgtaacgaagggaataataacgctgga
ttacgccgtcgtagcaatcacaatatctaa
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