Arsenophonus endosymbiont of Aphis craccivora: E3U36_06060
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Entry
E3U36_06060 CDS
T07584
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aed
Arsenophonus endosymbiont of Aphis craccivora
Pathway
aed03410
Base excision repair
aed03430
Mismatch repair
aed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E3U36_06060 (recJ)
03430 Mismatch repair
E3U36_06060 (recJ)
03440 Homologous recombination
E3U36_06060 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aed03400
]
E3U36_06060 (recJ)
DNA repair and recombination proteins [BR:
aed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
E3U36_06060 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
E3U36_06060 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
E3U36_06060 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
QLK87797
UniProt:
A0A7D6HFB5
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All DBs
Position
1159708..1161444
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AA seq
578 aa
AA seq
DB search
MNMKIQLRRRPKADDSHLPAHLSPVLRRLYAMRGVLSENELETGAKGLLNYQSLNGIETA
VQLLITALNEHWRIIVVGDFDADGATSTALTLRALGAMGYRHFDYLVPNRFEDGYGLSPQ
VVDQAIKRKAQLIITVDNGISSYEGVAVAQRHGIKVIITDHHLPGETLPCAEAIINPNLA
DCHFPSKALAGVGVSFYLMSALRAALRQTGWFEQQARKMPNLAELLDLVALGTVADVVPL
DSNNRILVYQGLNRIRAGRSCVGIKALIEVSKRDVSRLVANDLGFSIGPRLNAAGRLDDM
SIGVELLLTDDIVHARKLANELDSLNRTRREIEQDMQQEAWQIFEQIEEKRHQIPSGLAL
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGEGILNGSGRSIYGLHLRDALERLDTLNP
GLILKFGGHAMAAGLTLEEQKFTQFQENFANLMAELLDNDMLEGIIWSDGELNNEELSLD
IAELIRNGGPWGQAFPEPIFDGKFHLLQQRLVGDCHLKVMLEPLAGGPMIDGIAFNIDTA
YWPDNSIKMVELAYKLDVNEYRGNRNIQLLIQHLWPCE
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
ataaatatgaaaatacagcttcgtcgccgaccgaaagcagatgatagccaccttcctgct
catttgtctccggtattacgccgtttgtacgctatgagaggtgtgttatcagaaaatgag
ttagaaacaggtgcaaaaggattgcttaattaccaatcacttaatggtattgaaacagcg
gttcagttattaatcactgctctgaatgaacattggcgaattatagtggtcggtgatttc
gacgccgatggtgcaaccagtacggcattgacactgcgagcgctgggtgcgatgggatat
cgtcattttgattatttggttcctaaccgatttgaagatggctatgggcttagcccgcag
gttgttgatcaagcaattaaaagaaaagcgcaacttattattaccgttgataatggtata
tcttcctatgaaggcgttgctgttgctcaacgacacggtataaaagtgattattaccgac
caccatttaccaggagaaaccctgccttgtgcagaagcaattattaaccctaatttagct
gattgtcactttccatcaaaagcattagcgggggttggtgtcagtttttatttgatgtca
gcattacgtgctgcgttgcgccagactggttggtttgagcaacaagcacgtaagatgcct
aatctggctgaattattagatttggttgcattaggtacggtagccgatgttgttcccttg
gatagtaataatcgtattttagtctatcaaggtttaaaccgtattcgggcgggacgaagc
tgtgtcgggatcaaagccttgattgaagtttccaaacgtgatgttagtcgtctggttgct
aatgatttaggtttctcaattgggccacggcttaatgcagcgggaagattagatgatatg
tcaatcggtgtagaactgttattgactgatgatatcgttcacgctagaaaattggctaat
gaattagatagtttaaatcgtacccgccgcgaaattgaacaggatatgcagcaagaagct
tggcagatttttgagcaaatagaagaaaaacgtcatcaaatacccagtggtcttgcactt
tatcatcctgaatggcatcagggagtagtaggaatattggcttctcggatcaaagaacga
tttcatcgtccggttattgctttcgcgccggctggtgaagggattttgaatgggtcaggg
cgttccatctatggtttgcatttacgggatgcccttgaacgcttagatacgcttaatccg
ggattaattttaaagtttggtggccatgctatggcggcaggattaacgctggaggagcag
aagtttactcagtttcaagagaactttgctaatctgatggcagaactactggataacgat
atgcttgaagggattatttggagtgatggtgaactaaataatgaagagttgtcattggat
attgctgaactaattagaaatggtgggccatggggacaggcttttccagagccaattttt
gatggcaaatttcacctactacaacaacgtctcgtcggtgattgtcatctaaaagtgatg
ttagaaccactggctggtggtccgatgatagatggcatcgcctttaatattgataccgct
tattggcctgacaatagtattaaaatggtcgaattggcttataaactagatgtgaatgag
tatcgtggtaatcgtaacatccagttactcattcagcatttatggccttgcgaatag
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