Arsenophonus endosymbiont of Aphis craccivora: E3U36_09325
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Entry
E3U36_09325 CDS
T07584
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
aed
Arsenophonus endosymbiont of Aphis craccivora
Pathway
aed02020
Two-component system
aed02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aed00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E3U36_09325 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
E3U36_09325 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aed03021
]
E3U36_09325 (rpoN)
Transcription machinery [BR:
aed03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E3U36_09325 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Tenui_NS3
Motif
Other DBs
NCBI-ProteinID:
QLK88212
LinkDB
All DBs
Position
1859256..1860695
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AA seq
479 aa
AA seq
DB search
MKQSLQLRLSQQLAMTPQLQQAIRLLQLSTLELQHEIQQALESNPLLEQDDLYQEIETSD
INDNEPAALDSFDAIEQNDVPSELPLDTNWEEIYHSDNYPTLTNNFSDNDFPIYQGETLQ
TLQDYLSWQASLTPFTEIDAAIATAIIDAVDDSGYLSTTIEDIYAGLALADITQEEVDIV
LKRIQHFDPIGVAAKNLKDCLLIQLSALPRETPFLKEAKLIINDHLELIGNRDFRQLSRK
TKLKEPALKEVIAMIQLLDPKPGQIIQTNEPQYIVPDALVRKIDNDWQVALNTENIPRLK
INQHYASLGQYSDNEEDNQFIRNNLQDAKWLIKSLESRNETLLKVAQCIVENQQQFFEYG
EEYMKPMVLADIAYQVDMHESTISRVTSQKYLHSPRGIFELKYFFSSHVNTDTGGEASSI
AIRALVKKLIAAENPAKPLSDNKLTSILAEQGIQIARRTVAKYRESLSIPPSNQRKKLI
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagagtttgcaactccgactcagtcagcagttggcgatgacaccacagctacaa
caagctattcgtttgttgcaactttcaacattagaacttcaacacgaaattcagcaagct
cttgaaagcaatcctttacttgaacaagatgacctctaccaggaaattgaaacatcagat
attaatgataacgagccagcggcactagatagttttgacgccatcgaacaaaatgatgtg
ccaagcgaattacctttagatactaattgggaagaaatttaccactcagataactatcca
actctaaccaataattttagtgacaatgattttcctatctaccaaggagaaacattgcaa
acgttgcaagattatttatcctggcaagcatcattaacaccttttactgaaatagatgcc
gcgattgccaccgccattattgatgctgtggatgattccggctatttaagcaccactatt
gaagatatttacgcgggtttagccctagcagatattacccaggaagaagttgacattgta
ttaaaacggatccagcacttcgatccgattggcgtcgcagccaaaaatttaaaagactgc
ttactaattcagttatcagcgttacctcgcgagactccttttctaaaagaagctaaactg
ataattaacgaccatttagaattaattggcaatcgtgattttcggcaacttagccgaaaa
accaaattaaaagaaccggccttgaaagaagttatcgctatgatccaactattagatcct
aaacctgggcaaatcattcaaactaatgaaccacaatatattgtccccgatgctctggtg
cgcaaaatagataatgactggcaagtagctctaaatactgaaaacattccacgcttaaaa
atcaatcaacattatgcttctctaggtcaatactctgataatgaagaagataaccaattc
atccgtaacaacttacaagatgcaaaatggttaataaaaagtttagaaagtcgtaatgaa
actttattaaaagttgcccaatgtattgttgaaaatcaacaacagttttttgaatatggt
gaagagtatatgaaacctatggtactagcggatattgcttatcaggttgatatgcacgaa
tcgacgatttcccgtgtcacatcgcaaaaatatctacatagtccaagaggtatttttgaa
ctgaaatactttttttctagccatgttaacactgataccggaggagaagcctcttctatc
gctatacgcgcgctagtaaaaaaactcattgcggcagagaaccctgcaaaacccttgagt
gataacaaattaacgagcatactagcagaacaaggtattcaaattgctcgtcgtacagtt
gctaaatatcgagagtctctatccattccaccctcgaatcagcgtaaaaaactgatttga
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