Arsenophonus endosymbiont of Aphis craccivora: E3U36_11485
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Entry
E3U36_11485 CDS
T07584
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
aed
Arsenophonus endosymbiont of Aphis craccivora
Brite
KEGG Orthology (KO) [BR:
aed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aed03009
]
E3U36_11485 (rlmD)
Enzymes [BR:
aed01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
E3U36_11485 (rlmD)
Ribosome biogenesis [BR:
aed03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
E3U36_11485 (rlmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PCMT
TRAM
TRM5-TYW2_MTfase
RrnaAD
Methyltransf_11
MTS
DOT1
DUF1173
Motif
Other DBs
NCBI-ProteinID:
QLK88502
LinkDB
All DBs
Position
complement(2289873..2291213)
Genome browser
AA seq
446 aa
AA seq
DB search
MVQFYSSKQRKVKSDNLTVIAESLDVKGQGVAHYQGKIIFITDLLPGEQAQIQFTEEKRQ
FATAKVSKRLTDSLDRVAPFCRHFGICGGCQQQHVTPALQRAAKISRLEYLFQRETGSAV
KSLPVITGSEYVYRRRARFGLQYQHAERRLRMGFRQSQSNVLVELKMCPVLQPELEKLLL
PVADCLNKLAAVKHLGHVELFNADNGVSVILRHLKPLTTNDKILLTAFARRYNLNVYLVD
NSANRLKLVSLASNDSEPYYSIENVKLTFDPQNFIQVNPEINKKMVAQALDWLALEPQDR
VFDLFCGMGNFTLPIARHVNAVVGVEGVAELVAQGRFNASLNQLTNVEFYQADLEFDIDC
QPWAKMVFNKILLDPARAGAMGVMPHIIKFKPERVVYISCNPTTLVKDSQQLLTAGYQLM
SVRMLDMFPHTSHLESMALFCRDLSK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggtacaattttattcttcaaagcagcgtaaagttaaatccgataatttgacagtaata
gctgaaagtcttgatgttaagggtcaaggtgttgcgcattatcaaggaaaaataattttt
attactgatttacttcctggtgagcaagcacagattcaatttacagaagagaaaaggcaa
tttgccacggcaaaagtgagcaaacgattgactgatagtcttgatcgggtggcgcctttt
tgtcgtcattttggcatctgtggtggttgtcaacaacaacatgtgacgccggctcttcaa
cgtgctgcaaaaatcagtaggttagaatatttatttcaacgtgaaacgggcagtgcggta
aaatcattgccagttattaccggtagtgagtatgtatatcgccgtagagcgcggtttggt
cttcaataccagcatgcagagcgtcgtttacgcatgggttttcgtcagagccaatcaaat
gtgttagtggaactgaaaatgtgtcctgtgttacagccagaactagaaaaattattactt
cctgttgctgactgtttaaacaaattggcagcagttaaacatttaggtcatgttgagctt
tttaatgcagataacggcgtgagtgttattttgcgtcatcttaagccgttaactactaat
gataaaatattattaactgcttttgccaggcgctataatctcaatgtttatttggttgat
aatagtgccaatcggcttaaacttgttagtttggcaagtaatgatagtgagccttattat
tctattgagaatgtgaaattgacatttgatccacagaattttattcaagtaaatcctgaa
attaataaaaaaatggttgctcaagcgttggattggttagcgcttgagccgcaagatagg
gtttttgatctattttgtggcatgggtaattttaccttacctattgcacgtcatgttaat
gctgttgttggtgttgaaggcgtcgctgaattggtggcgcaaggacggtttaacgctagt
ttaaatcaattaaccaacgttgagttttatcaagctgatctcgagtttgacatagactgt
caaccttgggcaaaaatggtctttaacaaaatcttattagatcctgcacgcgccggtgct
atgggcgtaatgccacatattatcaaatttaaaccagaacgggtggtctatatctcctgt
aacccaacgacattagtaaaagatagtcaacaattacttacagccggttatcaacttatg
agtgtcaggatgttagatatgttcccgcatactagtcatctagagtctatggcacttttt
tgtcgcgatttaagcaaatag
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