Anabaenopsis elenkinii: IM676_01435
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Entry
IM676_01435 CDS
T09787
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aee
Anabaenopsis elenkinii
Pathway
aee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IM676_01435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aee03019
]
IM676_01435
03009 Ribosome biogenesis [BR:
aee03009
]
IM676_01435
Enzymes [BR:
aee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IM676_01435
Messenger RNA biogenesis [BR:
aee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IM676_01435
Ribosome biogenesis [BR:
aee03009
]
Prokaryotic type
rRNA helicases
IM676_01435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
HEM4
AAA_19
Cas3-like_C_2
ADAMTSL1
Motif
Other DBs
NCBI-ProteinID:
QOV23050
UniProt:
A0A7S6U2I2
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All DBs
Position
complement(316675..318189)
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AA seq
504 aa
AA seq
DB search
MTLSFQELGISQKRVEQLEKIGFTTPTNIQTQAIPQLLAGRDVVGQSQTGTGKTAAFSLP
ILEQLDVNQKVVQAMVLAPTRELAIQVHDAINQFAGNEGLRILAIYGGQSIERQMMQLKR
GVHMVVGTPGRMIDLLDRGCLKLDQVKWFVLDEADEMLSMGFIDDVIKILSQAPKERQTA
LFSATMPPSIRMIVNKFLRNPATVTVEQPKATPNKINQVAYLIPRHWTKAKALQPILEME
DPETALIFVRTRRTAAELTNLLQAAGHSVDEYHGDLSQQARERLLTRFRNRQVRWVVATD
IAARGLDVDLLSHVINYDLPDSAETYVHRIGRTGRAGKEGTAISLVQPFERRKQQAFERH
NRQNWQVLSIPTRAQIEARHIQKLQEQVKEALTGERLASFLPMVSELLEQYDAHAIAAAA
LQIAYDQTRPAWLQSGVDPQDDAPASKPKLIKRRSGEYSGDRNRSSWNKSDSNGGDEVKH
STPKPKLRTRRDTSSVSSSNAVRD
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgactctttcgttccaagaattaggtatttcacaaaaacgtgttgagcaattagaaaaa
attgggtttaccacacctactaatattcaaacccaagccataccccaactactagcaggt
agggatgtagtgggtcaatcccaaactggaacaggcaaaacagcagcattttccctgccc
atattagagcagctagatgtaaatcagaaagtcgtacaagcgatggtattggcgccaacc
cgtgagttagcaattcaagttcacgatgccatcaaccaattcgcaggtaacgaaggattg
cgtattctggcaatttatggaggtcaatctattgaacgccaaatgatgcaactaaaacgt
ggtgttcacatggttgtaggcacaccagggcggatgattgacttactagataggggctgt
ctcaaactcgatcaagtcaagtggttcgtcttggatgaagccgatgaaatgttgagcatg
ggctttattgatgatgtgatcaagatcctatctcaagcccccaaagagcggcaaacagcc
ttattctcagcgactatgccgccatcaattcgcatgattgtcaacaaattcctgcggaac
ccggcgacggtcactgtggaacagccaaaagccacacctaacaaaatcaatcaagttgct
tatcttatcccccgccactggacaaaagctaaagcattacagccaattctggaaatggaa
gatccagaaacagctttaatctttgtgcgcaccagacggacagccgcagaactgacgaat
ctactacaagcagcaggccacagtgtagatgaataccacggcgacttgtctcaacaagcg
cgggagcgattattgacccgattccggaatcgtcaagtacgttgggtagtagctactgat
attgcagcacggggtttagatgtcgatctgctctcccatgtaattaactacgatttgcca
gatagcgccgagacctatgttcaccgcattggtcgcactggtcgcgctggtaaagaaggt
acggcaatttcattggtacagccctttgagcgccgcaaacaacaggcatttgagcgccac
aatcgccaaaattggcaagtgctttccattcccacacgggcgcagattgaagcgcgacac
atccagaaattacaagaacaagtcaaagaagccttaactggcgaacgcctggcttcattc
ttgcccatggtcagcgaactactcgaacaatatgatgctcatgcgatcgccgcggctgca
ttacaaattgcttatgaccaaacccgtccggcttggttgcaatctggggtagatccccaa
gatgatgcacccgcatccaagccgaagttaatcaagcgtcgtagtggagaatattccggt
gacagaaaccgttcctcctggaataaatcagacagcaatggtggagacgaagtcaaacac
agcactcctaagcccaagctgcggactcgccgtgacacttcttctgtgtcatcgtcaaat
gcagtcagagactaa
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