Anabaenopsis elenkinii: IM676_08020
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Entry
IM676_08020 CDS
T09787
Name
(GenBank) DNA-directed RNA polymerase subunit beta''
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aee
Anabaenopsis elenkinii
Pathway
aee03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aee00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IM676_08020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aee03021
]
IM676_08020
03400 DNA repair and recombination proteins [BR:
aee03400
]
IM676_08020
Enzymes [BR:
aee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IM676_08020
Transcription machinery [BR:
aee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IM676_08020
DNA repair and recombination proteins [BR:
aee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IM676_08020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
QOV24630
UniProt:
A0A7S6U0I9
LinkDB
All DBs
Position
1807259..1811407
Genome browser
AA seq
1382 aa
AA seq
DB search
MTKETNVFRNRVVDKGQLRKLISWAFVNYGTARTAVMADKLKDLGFRYATKAGVSISVDD
LMIPPTKRSLLEAAEEEIRATENRYQRGEITEVERFQKVIDTWNGTSEALKDEVVVHFKS
TDPLNSVYMMAFSGARGNISQVRQLVGMRGLMADPQGEIIDLPIKTNFREGLTVTEYIIS
SYGARKGLVDTALRTADSGYLTRRLVDVSQDVIIREIDCGTTRGIPLTAMTEGGKILIPL
SQRLLGRVIAEDVIHPETQEIIAPRNTPVSDELAEKIERGGITEVVVRSPLTCEAARSVC
QNCYGWSLAHGKMVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGEVAQQVRSKSEG
TIRLPRKLRTRSYRTRHGEDALYVEANGVIHLHPLTTTGDAAITNSPLEVQEIKVTQGST
LYVQNGQQVKVGQLLAEVALGGRTTRTNTEKAVKDVASDLAGEVLFADVVPEQKTDRQGN
TTTTAARGGLIWVLSGEVYNLPPGAELVVENGDQINSNGVLAETKLTTQHGGVVRLPANE
PGKNAREVEIITASVILDQASVTVESSQGRNHYLITTSNNQVFNLRATPGTKVQNNQVVA
ELIDDRYRTNTGGLLRFAGVEVQKKGKAKLGYEVVQGGTLLWIPEETHEVNKDISLLLVE
DGQFVEAGTEIVKDIFCQNSGVIEITQKNDILREVVIKPGELLLVDTSTSAALSSNLTTS
LTTDGDESSPLDSHGGIDSDLEKIMALDNTFIQPGQEFQGNISTELRYIQYVETPEGPAL
LSRPVVEFPVSNQPDVPSTTSINQQTGRSIQLRAIQRLPYKDSERVKSVDGVELLRTQLV
LEIEQDGEDHSSSPLAADIELVEDTEQPDIHRLQLVILESLVVRRDIAADATQGSTQTTL
EVEDGDSIAPGAVVARTKILAKEGGIVRGVRADGESVRRCLVLRQDDQVVVNCGGEPTVK
PGDLLVEGGEVAPGIHTEESGQVWSVTPLPSGEYAVYVRLGRPYRVSPGAVLQVENGDLV
QRGDNLVLLVFERAKTGDIIQGLPRIEELLEARKPKEACILARRSGELQVVYGDGGDEAI
AGRVIEPGGTVTEYPLGPGQNLVIPDGGTVKAGEPLSDGPSNPHEILDVFFNLGSEDGIY
ACASHALQKVQTFLVNEVQMVYQSQGIDIADKHIEVIVRQMTNKVRIDDGGDTTMLPGEL
VELRQVEQVNEAMAITGGARAQYTPVLLGITKASLNTDSFISAASFQETTRVLTEAAIEG
KSDWLRGLKENVIIGRLIPAGTGYNTYEEPGALDEYTQIESTGVLDEVDDAMDMVLDDRT
ARSYNLDAADLGDGAFGLKQPGRGMSRSILDEEDELIADDIVNDLVEDEDEYEDDLDEDE
DF
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagaaactaatgtatttcgcaatcgggtagttgataaaggtcaactgagaaaa
ttaatatcctgggcttttgtcaactatggcactgctcggactgcggtgatggcagataaa
ctaaaggatttagggttccgctacgctactaaggcgggagtttccattagtgtggatgat
ttaatgattccacccactaagcgatcgctcctagaagcagcagaggaagaaatcagagct
acggaaaaccgctatcaacgaggggaaatcacggaagtagaacggttccaaaaggttatc
gacacctggaatggaaccagtgaagccctcaaagatgaagtagtagtacacttcaaaagc
accgaccccttaaactctgtgtacatgatggctttctcaggagctagagggaatatttcc
caagtccgtcagttggtggggatgcgcggcttgatggctgacccccaaggggaaatcatt
gacctacccatcaaaaccaacttccgggaaggcttaacagtgactgagtatattatttcc
tcctatggagcgcgtaagggcttggtagatacggctctacgtacagcggactccggttat
ctcacccgtcgcttagtggatgtttcccaagatgtgattatccgcgaaatagactgcggt
actactaggggtattcctttaacagccatgactgaaggaggcaagattttaatacccctg
tctcaacgcctcctaggacgggtaattgcagaggatgtgattcacccggaaactcaagaa
atcatcgcccctcgtaatacaccagtatccgatgaattagcagaaaagattgagcgcggg
ggaattacagaggtagtagtgcgatcgcccctcacctgcgaagccgcccgctctgtctgt
caaaactgttacggctggagtttagcccatggcaaaatggttgacctaggggaagctgta
gggattatcgccgcccagagtattggggaaccaggaacccagttaaccatgcgtacattc
cacacaggtggtgtgtttaccggcgaagtcgcccaacaggttcgctccaagagtgaagga
accatccgcctcccccggaaactccgcacccgcagctatcgtacccgccatggagaagat
gctttatacgtggaagccaatggggtgattcacctccaccccctgacaacaactggggat
gcagccattaccaactcccccttggaagttcaagaaattaaagtcacccaaggttctacc
ctctatgtccaaaacggacaacaggtaaaggtaggacaactattagcggaagtagcccta
gggggacgcaccaccaggactaatacagagaaagcggtcaaagatgtagcttccgacttg
gcgggagaagtgttatttgctgatgttgttccagaacaaaaaactgatcgccaaggtaat
accaccaccactgcagctaggggtggtttaatttgggtactctccggtgaagtttataat
ttaccccccggtgctgaactggtagtagaaaatggagaccagattaatagtaatggcgtt
ttagcagaaaccaaactcaccacccaacatgggggggtagttcgcctaccagctaatgaa
ccgggtaagaacgccagggaagtagaaattatcacagcttctgtcatcctagaccaagct
tcagtgacggtggaaagttcccaaggacgtaaccactatttaattaccaccagcaacaac
caagtatttaacctgcgggcgacaccagggacaaaagtacaaaataaccaggtggtcgcg
gaactaattgacgatcgctaccgcaccaacacaggagggttactccggtttgcaggggta
gaggtacagaaaaaaggcaaagccaaacttggttacgaagtcgtacaaggtggtaccctg
ctgtggattcccgaagaaacccacgaagtcaataaagatatctccctcctgttggttgaa
gatggacaatttgtggaagctggaacagaaatagttaaagatattttctgtcaaaacagc
ggggtgatagaaatcacccagaaaaatgatatcttgcgagaggtagtaattaaacccggt
gaattactgctggtagatacttcaacttcagctgcgctcagttcaaacttaactacaagc
ttaactactgatggggacgaatcctctcctctagattcccatggggggatagattccgac
ctagaaaaaatcatggcactggataataccttcatccaaccgggtcaggagttccaaggg
aacatatccacagagttacgctacatccaatatgtagaaactcccgaaggtccggctctt
ttaagtcgtcctgtagttgagttccccgtatctaaccagcctgatgtaccatctacaacc
tcaattaaccaacaaacggggcgatctattcaactacgcgccatacaacgtttaccctat
aaggattcagaacgggtaaaatcagtggatggggtggaactattgcgtacccagttagtg
ttggaaattgagcaagatggggaagaccatagtagttctcccttggctgcggatattgaa
ttagttgaggatacagagcaaccagatattcaccgcttacagctggtaattttggaatct
ttagtggtgcggcgagatattgcagcggatgcaacccaaggtagtacccaaactactttg
gaggttgaggatggagacagcatcgcccctggtgcggttgtagctcggacgaagatttta
gctaaggaagggggaatagtccggggtgtgcgggctgatggggaatccgtgcgccgctgc
ttggtgttgcgtcaggatgaccaggtggtggttaactgtggtggcgaacccacggtgaag
ccaggtgatttattagtcgaaggtggagaggtagcgccgggtatccacactgaggagtct
ggtcaggtgtggtctgtaactcctttaccttctggtgaatatgctgtttatgtgcggctt
ggtcgtccttaccgagtcagtcccggtgcagtgttgcaggtggagaatggggacttggtg
caacggggtgataacttggtgttgttggtgtttgagcgggcgaagactggggatattatc
caagggttaccgcggattgaagaattgctggaagcccgtaaacccaaggaagcctgtatt
ttagcccggcgctctggggagttacaagtggtttatggtgatggtggggatgaggcgatc
gctgggagagtcattgaacccggtggaacagtgacggagtaccccctgggacctggacaa
aatttagtcattccagacggggggacagtgaaggcgggggaacccttgagcgatggaccc
tctaacccccatgaaattttggatgtcttctttaacttaggttccgaggatgggatttat
gcttgtgctagtcatgcactgcaaaaggtgcaaacctttttagtgaatgaagtccagatg
gtgtatcagtcccaggggattgatattgctgacaaacacattgaagtcattgtccgccaa
atgaccaacaaggtgaggattgatgacggtggcgacacaaccatgttaccaggggagttg
gtggaactccgacaggtagagcaggtgaatgaagctatggccattacagggggtgcaaga
gcacagtatacccctgtgttgctggggattactaaggcatcgttgaatactgatagcttt
atttccgctgcatccttccaggagacgaccagagttttaaccgaggctgcgatcgaagga
aaatccgactggctgcgggggttgaaagagaacgtgattattggtcggttaattccagca
gggactggttacaacacctacgaggagccgggggcgttggatgagtacacacagattgag
agtacaggggtgttggatgaggttgatgatgccatggatatggtgttagatgaccgcaca
gccaggagttacaacttggatgctgctgatttaggtgatggtgcttttgggttaaagcaa
cccggaagggggatgagtcggtctattttggatgaagaggatgagttaattgctgatgat
atagttaacgacctggtagaagatgaggatgagtatgaggatgatttagatgaggatgag
gatttttaa
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integrated database retrieval system
