Aeromicrobium yanjiei: GEV26_02720
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Entry
GEV26_02720 CDS
T06272
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aef
Aeromicrobium yanjiei
Pathway
aef03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aef00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GEV26_02720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aef03019
]
GEV26_02720
03009 Ribosome biogenesis [BR:
aef03009
]
GEV26_02720
Enzymes [BR:
aef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GEV26_02720
Messenger RNA biogenesis [BR:
aef03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GEV26_02720
Ribosome biogenesis [BR:
aef03009
]
Prokaryotic type
rRNA helicases
GEV26_02720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
UvrA_inter
HEM4
XanC_C
P-loop_SecA
CMS1
Flavi_DEAD
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QGG40368
UniProt:
A0A5Q2MCS2
LinkDB
All DBs
Position
507777..509591
Genome browser
AA seq
604 aa
AA seq
DB search
MTSDLSVDTPTFADLGLIDTLVERLGSLGYETPTPIQSRAIPTLLEGKDVVGLAQTGTGK
TAAFALPILQKIDPKNSKTQAIVLAPTRELALQVCEAITTYAVNLPGIRVLPVYGGQGYG
FQLQGLQRGAHIVVGTPGRVIDHLERGSLDLTALEFLVLDEADEMLNMGFAEDVERILAD
TPEYKQVALFSATMPKMIRSLAKKYLHDPVDIATPKATTSTTTVRQRWIQVSHHHKVDAL
TRLLEVETGDGMIVFVRTKSATEELAEKLRARGYTAAALNGDLVQAQRERTVSQLKSGQI
DIIVATDVAARGLDVERITHVVNYDIPHDTEAYVHRIGRTGRAGRTGEAILFVTPRERRM
LSAIEKVSGRPVEEMSVPSAEEVNERRAGRFAQAITSSMGSPQFHAFRSLVEEYASENDV
SMTDVAAALAVMSQTDKEFFLRPDPPKKPARERDRDFEPRKKPAGFDRSDRLPAEGAAVY
RVAVGKRHKIGPSAIVGALANEGSLKRSDFGKITIGQDHTLVELPADLPDAVFEALANTR
ISGKLIDLQPDSGPPIRRTREDRKGNPPPKRSHENRPYPSKAPDKGSYESKGSSGKPARK
PRHK
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgacatccgacctttccgtcgacacgcccaccttcgccgatctcggcctcatcgacacc
ctcgtcgagcgcctcggctcgctcgggtacgagacgccgaccccgatccagtcccgcgcg
atccccaccctgctcgagggcaaggacgtcgtgggtctcgcgcagacgggcaccggcaag
acggccgccttcgcgctgccgatcctgcagaagatcgacccgaagaacagcaagacgcag
gccatcgtcctcgcgccgacccgtgagctcgcgctccaggtgtgcgaggccatcacgacg
tacgcggtcaacctcccgggcatccgggtcctgccggtctacggaggacagggctacggc
ttccagttgcagggcctgcagcgcggcgcgcacatcgtggtcggcacccccggccgcgtc
atcgaccacctggagcggggcagcctcgacctgactgcgctggagttcctcgtgctcgac
gaggccgacgagatgctcaacatgggcttcgccgaggacgtcgagcgcatcctcgcggac
acgcctgagtacaagcaggtcgccctgttctcggcgaccatgcccaagatgatccgcagc
ctggccaagaagtacctccacgacccggtcgacatcgcgacgcccaaggcgacgacgtcg
acgaccacggtccgccagcgctggatccaggtctcccaccaccacaaggtcgatgccctg
acgcgtctgctcgaggtcgagaccggcgacggcatgatcgtgttcgtccgcaccaagtcg
gccaccgaggagctcgccgagaagctgcgcgcccgcggctacaccgcggcagccctcaac
ggcgacctggtccaggcccagcgcgagcgcacggtctcgcagctcaagtccgggcagatc
gacatcatcgtcgcgaccgacgtcgcggcccgtggcctggacgtcgagcgcatcacgcac
gtcgtcaactacgacatcccgcacgacaccgaggcgtacgtccaccgcatcggtcgcacg
ggccgcgccggccgcacgggcgaggcgatcctgttcgtcaccccccgcgagcgccgcatg
ctctcggcgatcgagaaggtctcgggccgccccgtcgaggagatgtccgtcccgtccgcc
gaagaggtcaacgagcgtcgcgcgggccgcttcgcccaggcgatcacctcgagcatgggc
tcgccgcagttccacgcgttccgctcgctcgtcgaggagtacgcgagcgagaacgacgtg
tcgatgaccgacgtcgcagcagcccttgcggtcatgagccagacggacaaggagttcttc
ctgcgtcccgatccgcccaagaagcccgcacgcgagcgcgatcgcgacttcgagccccgc
aagaagcccgcaggcttcgatcgcagcgaccggctccccgccgagggcgctgcggtctac
cgcgtcgcggtcggcaagcgccacaagatcggcccgtccgcgatcgtcggtgcactggcc
aacgagggcagcctcaagcgctcggacttcggcaagatcacgatcggccaggaccacacg
ctcgtggagctcccggcggacctgccggacgccgtcttcgaggcgctggccaacacccgc
atctcgggcaagctgatcgacctgcagcccgacagcgggccgccgatccgccgcacccgc
gaggaccgcaagggcaacccgcccccgaagaggtcgcacgagaaccggccctacccgtcc
aaggcgccggacaagggttcgtacgagtcgaagggatcgagcggcaagcccgctcggaag
ccgcggcacaagtga
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