KEGG   Aeromicrobium yanjiei: GEV26_04575
Entry
GEV26_04575       CDS       T06272                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
aef  Aeromicrobium yanjiei
Brite
KEGG Orthology (KO) [BR:aef00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aef03400]
    GEV26_04575
Enzymes [BR:aef01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GEV26_04575
    5.6.2.6  RNA 3'-5' helicase
     GEV26_04575
DNA repair and recombination proteins [BR:aef03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    GEV26_04575
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr WH4_Lhr WH2_Lhr DEAD Helicase_C ResIII DEXQc_Suv3 GntR TrmB Cas3-like_C_2 HTH_Crp_2 Fe_dep_repress AAA_22 PhoH DUF6406 T4SS-DNA_transf
Other DBs
NCBI-ProteinID: QGG40696
UniProt: A0A5Q2MI21
LinkDB
Position
complement(893436..897992)
AA seq 1518 aa
MPDPLARFAPATRAWFTESFEAPTPAQMGAWDGVAGDEHVLVVAPTGSGKTLAAFLSAID
RLMHAEQSEGTRVLYISPLKALAVDVERNLRSPLVGITQAAARRGDEFQEVTVGVRSGDT
SPRDRRALVTRPPDILITTPESLFLMLTSAARETLRSVDTVIVDEIHAVAGTKRGAHLAV
SLERLDALLDTPARRIGLSATVRPHDEVARFLAGSSPVRVVAPESPSRLEMHVEVPVEDM
TSIPAPPRDEGSGARALEEDAPRGSIWPHVEESVMRRVLEHRSTIVFVNSRGVAERLTAR
LNEAYAKHLEAESVPRDSPRPPAQLMGGSAQSEGAEPVLARAHHGSVSKDQRALIEDELK
SGRLRCVVATSSLELGIDMGAVDLVVLVSTPPSVASALQRVGRAGHQVGELSRGVLYPTS
RQDLLGATVTTARMQQGLIERLDIPANPLDILAQQTVAATALESLDVEEWFDTVRRSAPF
ATLPRSAYDATLDLLSGRYPSDEFAELRPRLVWDRDAGTITGRPGAQRLAVTSGGTIPDR
GMFGVFLAAGTEETGSRKVGELDEEMVYESRINDVFALGATSWRIQEITHDRVNVTPAFG
QPARLPFWKGDAIGRPHELGEAIGAFVREAAALSAEQLAQQTAGLGLDRRASDNLAAYLG
EQKAATGQVPSDRTLVVERFRDELGDWRVVLHSPFGRRVHAPWALAVAARIVERYGMDGS
VVASDDGIVARIPDTETEPPGADLFVFEADELDKIVTEEVGGSALFASRFRECAARALLL
PRRNPGSRAPLWQQRQRSAQLLDVARKYPTFPILLETARECLQDVYDLPALTALTRRLAS
REVQIAEVTTERASPFAQNLLFGYVAAFLYEGDTPLAERRASALTLDPTLLAELLGRAEL
RELLDPDVLERTERELQRLTADRQAKDVEGVADLLRMLGPLTETEVAARLQPDVAVHAST
WLGELREARRAIEVSMVGEIRWAVVEDAGRLRDALGVVIPLGVSEAYLESPADPLTDLIS
RHTRTHGPFTTQEVAERFGLGTAVVQQVLRRLSRDGRLTEGEFRPQATGSEWVEPGVLRR
IRSRSLAAARQQVEPVDPGTFARFLPSWQGVGGSLRGPDGVLTVIDQLAGLALPASAWES
LVLPARVRDYSPAMLDELTSAGEVVWSGAGTLPGNDGWVQLHPADFVLRAAGAQPGETDA
LHTAIVEALAGGGAFLFRQLVDALGTDNGLPDHTLVTEALWDLVWSGQVSNDTFAPLRTL
VGRGGAHRTTRPTPRARIHGRRPRSPRVAAQGPPTVSGRWFALAETTSDPTALQLARTEA
LIGRYGVVTRGSVMAEQTPGGFAGIYRVLRELEQTGSVLRGYYIETLGAAQFAATSTVDR
MRAHATDDDRPTDARALTLAATDPANPYGAALPWPGRAAEADSTRHRPARKAGSLVVLHD
GRLVVYLERGGKKALVFDDHPARLAAAATSLAATVRGRRISRLTIETVDGQPVAPSPFGE
ALAEAGFERTIKGLRLDA
NT seq 4557 nt   +upstreamnt  +downstreamnt
atgcccgatccgctcgccaggttcgcgcccgcgacccgggcgtggttcaccgagtccttc
gaggccccgacccccgcccagatgggcgcgtgggacggcgtcgccggcgacgagcacgtg
ctggtcgtcgcgccgaccggctcgggcaagacgctcgcggcgttcctctcggcgatcgac
cggctgatgcacgcggagcagtcggagggcacccgggtgctctacatctcgccgctcaag
gcgctcgccgtcgacgtcgagcgcaacctgcgctcgcccctggtcggcatcacgcaggcc
gcggcacggcgcggcgacgagttccaggaggtcactgtcggcgtccgctcgggcgacacc
tccccgcgcgaccggcgcgccctcgtcacccggccccccgacatcctcatcacgacaccc
gagtcgctgttcctcatgctcacctcggccgcgcgcgagacgctacgcagcgtcgacacc
gtgatcgtcgatgagatccatgccgtggccggcaccaagcggggcgcccacctggcggtg
tcgctcgagcggctcgacgccctgctcgacacccccgcgcgacggatcggcctgagcgcg
acggtgcgccctcacgacgaggtggcccgtttcctcgccgggtccagcccggtgcgcgtc
gtcgcccccgagtcgcccagccgcctggagatgcacgtcgaggtcccggtcgaggacatg
accagcatcccggcgccgccccgcgacgagggcagcggcgcccgcgccctcgaggaggac
gcaccgcgcggcagcatctggccgcacgtcgaggagtccgtgatgcgccgggtcctcgag
caccgctcgacgatcgtcttcgtcaactcccgcggtgtggccgaacgcctcaccgcgcgc
ctcaacgaggcgtacgccaagcacctcgaggccgagtcggtgccccgggactcccctcgt
ccccccgcccagctgatgggcggcagcgcacagtccgagggggccgagcccgtgctggcg
cgcgcccaccacggctcggtcagcaaggaccagcgggcgctgatcgaggacgagctcaag
tcgggccggctgcggtgcgtcgtggcgacgtcgagcctggagctgggcatcgacatgggc
gcggtcgacctggtcgtgctggtgtcgacgcccccgtcggtcgcgagcgcgctgcagcgg
gtcggccgcgcgggtcaccaggtcggcgagctgtcccgcggcgtgctctatcccacgtca
cgccaggacctgctcggggccaccgtgaccaccgcacgcatgcagcagggcctgatcgag
cggctcgacatccccgccaacccgctcgacatcctcgcccagcagaccgtcgccgcgacc
gcgctggagagcctcgacgtcgaggagtggttcgacaccgtccgacgcagcgccccgttc
gcgacgctgccccggtcggcctacgacgcgacactcgacctgttgtcgggccgctatccc
tccgacgagttcgccgagctgcgcccacgcctggtgtgggaccgcgacgccgggacgatc
acgggtcggcccggtgcccagcgcctggccgtcaccagcggcgggacgatccccgaccgc
ggcatgttcggggtcttcctcgcggccggcaccgaggagaccggctcccgcaaggtcggc
gagctcgacgaggagatggtctacgagtcgcggatcaacgacgtcttcgccctcggcgcc
acgagctggcgcatccaggagatcacccacgaccgggtcaacgtcacgcccgcattcggc
cagcccgcgcggctgccgttctggaagggcgacgcgatcggtcgaccccatgagctcggc
gaggcgatcggcgcgttcgtgcgtgaggccgcggccctctctgccgagcagctcgcccag
cagacggccggtctcggcctggaccggcgggcctcggacaacctggccgcctacctcggc
gagcagaaggccgcgaccgggcaggtcccgtccgaccgcacgctcgtggtcgagcggttc
cgcgacgagctcggcgactggcgggtcgtcctgcactcgccgttcggtcgccgcgtccac
gccccgtgggccctggccgtcgccgcccgcatcgtcgagcgctacgggatggacggctcg
gtcgtggccagcgacgacggcatcgtcgcgcgcatccccgacaccgagaccgagcccccg
ggcgccgacctgttcgtcttcgaggccgacgagctcgacaagatcgtcaccgaggaggtc
ggcggctccgccctgttcgcgtcacggttccgcgagtgcgcggcccgcgcgctgctcctg
ccccgccgcaaccccggatcgcgcgcccccttgtggcagcagcgccagcgctcggcgcag
ctgctcgacgtcgcccgcaagtacccgaccttcccgatcctgctcgagaccgcgcgggag
tgcctccaggacgtctacgacctgccggccctcaccgccctgacccggcgcctggcttcc
cgtgaggtgcagatcgccgaggtcaccaccgagcgcgcctcgccgttcgcccagaacctc
ctgttcggctacgtcgcggccttcctctacgagggcgacacgccgctggccgagcgccgg
gcctcggccctgacgctcgaccccacgctgctcgccgagctgctcggccgggccgagctg
cgcgagctgctcgaccccgacgtgctcgagcgcaccgagcgcgagctgcagcgactcacc
gcggaccggcaggccaaggacgtcgagggcgtcgcggacctcctgcggatgctgggcccg
ctcaccgagacggaggtcgccgcccgtctgcagcccgacgtcgcggtgcacgcctcgacg
tggctgggcgagctgcgcgaggcccgtcgcgcgatcgaggtgtcgatggtcggcgagatc
cgctgggccgtcgtggaggacgccggacggctgcgcgacgccctcggcgtggtgatcccg
ctcggcgtctccgaggcgtacctcgagtcccccgccgatccgctgaccgacctgatctcc
cggcacacccgcacccacggaccgttcacgacccaggaggtcgcggagcgcttcggcctc
ggcaccgccgtggtgcagcaggtcctgcgccggctgtcccgcgacggacggctgaccgag
ggcgagttccggccccaggcgacgggcagcgaatgggtcgagcccggtgtcctgcgccgc
atccggtcgcgctcgctggctgccgcccgccagcaggtcgagccggtcgaccccggcacg
ttcgcccgcttcctgccgtcctggcaaggcgtcggcggcagcctgcgcggccccgacggc
gtcctgaccgtgatcgaccagctggccggcctcgcgctgccggcctcggcctgggagtcc
ctggtcctgcccgcccgcgtccgggactactcccccgcgatgctcgacgagctgacctcg
gccggtgaggtggtgtggtccggcgcgggcacgctgcccggcaacgacggctgggtccag
ctgcatcccgccgacttcgtgctgcgcgctgcgggcgcccagccgggcgagaccgacgcg
ctgcacaccgcgatcgtcgaggcgctcgccggaggcggtgccttcttgttccgccagctc
gtcgacgcgctcggcaccgacaacggcctgcccgaccacacgctggtgaccgaggcgctg
tgggacctggtctggagcgggcaggtcagcaacgacaccttcgcgccgctgcgcacgctc
gtgggtcgaggcggcgcccaccgcacgaccaggcccacgccccgggcccgcatccacggt
cgccgaccccgttcgccccgcgtcgcggcgcagggcccgccgaccgtgagcgggcggtgg
ttcgcactcgccgagacgaccagcgaccccaccgcactgcagctggcccgcaccgaggcg
ctcatcggccgctacggcgtcgtgacgcggggatcggtcatggccgagcagacgccgggc
gggttcgcaggcatctaccgcgtgctgcgcgagctcgagcagaccggctcggtgctgcgt
ggctactacatcgagacgttgggggccgcccagttcgccgcgacctccacggtcgaccgc
atgcgcgcccacgcgaccgacgacgaccggcccaccgatgcgcgcgccctgacgctggcc
gcgaccgacccggccaatccctacggcgcggccctgccctggcccgggcgcgccgcagag
gcagactcgacccggcaccgaccggcccgcaaggccggctcgctggtggtcctgcacgac
ggccggctcgtggtctatctcgagcggggaggcaagaaggcactggtgttcgacgaccat
cccgcgcgcctcgccgccgccgccacctcgctggcggccacggtccgcggccggcgcatc
agccggctgacgatcgagaccgtcgacggccagccggtcgcgcccagcccgttcggcgag
gcgttggccgaggcgggcttcgagcgcacgatcaaggggcttcgactcgatgcctga

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