Aeromicrobium yanjiei: GEV26_06995
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Entry
GEV26_06995 CDS
T06272
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aef
Aeromicrobium yanjiei
Pathway
aef03030
DNA replication
aef03430
Mismatch repair
aef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GEV26_06995 (dnaE)
03430 Mismatch repair
GEV26_06995 (dnaE)
03440 Homologous recombination
GEV26_06995 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aef03032
]
GEV26_06995 (dnaE)
03400 DNA repair and recombination proteins [BR:
aef03400
]
GEV26_06995 (dnaE)
Enzymes [BR:
aef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GEV26_06995 (dnaE)
DNA replication proteins [BR:
aef03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GEV26_06995 (dnaE)
DNA repair and recombination proteins [BR:
aef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GEV26_06995 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QGG41132
UniProt:
A0A5Q2MJB9
LinkDB
All DBs
Position
1390815..1394351
Genome browser
AA seq
1178 aa
AA seq
DB search
MSSDSSFVHLHVHTEYSMLDGAALLDGLFERTAELGMPSIAMTDHGNLHGAYDFYSKAKA
HGVKPIIGMEAYLTPNIPRHEKKAVLWNKGARDADVAGRGAYTHMTLLSETTEGMHNLFR
IGSYASLEGQYRKPRADRDLLQRYGKGLIATTGCPSGEIQTWLRIGNYEKARASAAEFQD
IFGKENFFLELMDHGLEIERTVRDGLLRLKADLDLPAIATNDSHYTSPEDAEAHSALLCV
QSGSTLTDPNRFKFDSNDFYIKSAAEMRDLWEDRFDLKEACDNTLLIAERCNVEFTESNG
GYMARADIPDGETEESWFVKEVWRGIESRYPGDKLTDEVRARTEMELDVVRTKGYCGYYL
VVADFINWAKDNGIRVGPGRGSGAGSIAAYALRITDLCPLTHGLIFERFLNPERPSMPDF
DIDFDERRRSEVIRYVSNKYGEERVAMIATFGRLKSKAAIKDAARVMDYPFSHGERITKA
LPADIMGKGVTLKGLFDKNDKRYGDGGDFRKLHDEDADVRKIYQTALGLEGQIRQWGVHA
AGVIMSSDPLIDIVPIMKREQDGAIITQFDYPMCEALGLVKMDFLGLRNLTVLDDALINI
KRNRGIDLVLEDLDFEDQATYDLLARGDTLGVFQLDGGPMRALLRSMKPDKFEDISAVGA
LYRPGPMGADSHNKYARRKNGREPIDPIHPELEKPLETVLGETYGLIVYQEQVMEIAQVL
AGFSLGQADNLRRAMGKKKKSELDKQYAGFQQGMLERGYSQKAITTLWDILLPFSDYAFN
KAHSAAYGVISYWTAYLKANYPAEYMAALLTSTRVDKDKSAIYLNECRRMGIKVLPPDVN
ESVSNFASVGPDIRFGLGAIRNIGENVVAGIVEGRTTGGPYADFNDFLDKVPTLVCNKRV
LDSLIKAGAFDSLGHRRRALTTVAEEGVDLYIDLKRQAAIGQDSLFGGGDDVFTGGRVEV
PETMPEWEKTQLLAFERDMLGLYVSDHPLQGLEHVLRASSDSTIGDLLTNTDLPDGSTIR
ICGLITGVQRRMSKKGDPWASITIEDLEGGIEVMVFPGAYQLAMPVLVPDTIVVVKGRVR
RKDEGIELNALEVTMPAMGSGGPERPLVVTLPVARCTADTIGTFKQVLSAHPGMSEVHLR
LVGNGTTKVMRLDDSLRVAQSSSLIADLKELLGPHCLS
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtgactcgtcattcgtgcacctgcacgtccacacggagtactcgatgctcgac
ggcgcggctctcctcgacgggctcttcgaacgcaccgcggagctgggcatgccgtcgatc
gcgatgaccgaccacggcaacctgcacggcgcctacgacttctacagcaaggccaaggcg
cacggggtcaagccgatcatcggcatggaggcctatctcacgcccaacatcccgcggcac
gagaagaaggccgtgctgtggaacaagggcgcccgggacgccgacgtcgcgggccgcggc
gcgtacacgcacatgacgctgctctcggagaccaccgaaggcatgcacaacctgttccgc
atcggctcctacgcgagcctcgagggccagtaccgcaagccccgtgccgaccgtgacctg
ctgcagcgctacggcaagggcctgatcgcgacgacgggctgcccgtccggggagatccag
acctggctgcgcatcggcaactacgagaaggcgcgtgcctcggccgccgagttccaggac
atcttcggcaaggagaacttcttcctcgagctgatggaccacggcctcgagatcgagcgc
acggtccgcgacgggctgctgcgactcaaggccgatctcgacctgcctgccatcgcgacc
aacgactcgcactacacgagccccgaggacgccgaggcgcactcggccctgctgtgcgtc
cagtccggcagcaccctgaccgaccccaaccgcttcaagttcgactccaacgacttctac
atcaagtccgccgccgagatgcgcgacctgtgggaggaccggttcgacctcaaggaggcg
tgcgacaacacgctcctgatcgccgagcggtgcaatgtcgagttcaccgagtccaacggt
ggctacatggctcgcgccgacatccccgacggggagaccgaggagagctggttcgtcaag
gaggtctggcggggcatcgagagccgctaccccggcgacaagctgaccgacgaggtccgc
gcccgcaccgagatggagctcgacgtcgtccgcaccaagggctactgcggctactacctc
gtggtcgccgacttcatcaactgggccaaggacaacggcatccgggtcggcccggggcgt
ggatcgggtgcgggctcgatcgccgcgtacgcgctgcgcatcaccgacctgtgcccgctc
acgcacggcctgatcttcgagcgcttcctcaaccccgagcgcccctcgatgcccgacttc
gacatcgacttcgacgagcgccgccgcagcgaggtcatccgctacgtcagcaacaagtac
ggcgaggagcgcgtcgcgatgatcgcgacgttcggccggctcaagtccaaggccgcgatc
aaggacgccgcccgcgtcatggactacccgttctcgcacggtgagcgcatcaccaaggcg
ctcccggccgacatcatgggcaagggcgtgaccctcaagggcctgttcgacaagaacgac
aagcgctacggcgacggcggtgacttccgcaagctccacgacgaggacgcggacgttcgc
aagatctaccagaccgccctcggcctggagggccagatccgtcagtggggcgtccacgcc
gccggcgtcatcatgtccagcgatcccttgatcgacatcgtgccgatcatgaagcgcgag
caggacggcgcgatcatcacccagttcgactacccgatgtgcgaggcgctcgggctggtc
aagatggacttcctgggcctgcgcaacctcacggtcctcgacgacgcgctgatcaacatc
aagcgcaaccggggcatcgacctggtcctggaggacctcgacttcgaggaccaggcgacg
tacgacctgctcgcccgcggtgacacgctcggggtgttccagctcgacggcgggccgatg
cgtgcgctcctgcgcagcatgaagcccgacaagttcgaggacatctcggccgtcggcgcg
ctctaccgccccggtccgatgggcgcggactcgcacaacaagtacgcccgccgcaagaac
ggccgcgagccgatcgacccgatccaccccgagctggagaagccgctggagacggtgctg
ggggagacctacggcctgatcgtctatcaggagcaggtcatggagatcgcccaggtgctc
gccgggttctccctcggacaggccgacaacctgcgtcgcgcgatgggcaagaagaagaag
tccgagctggacaagcagtacgcaggcttccagcagggcatgctcgagcggggctactcg
caaaaggcgatcacgacgctgtgggacatcctgctcccgttctcggactacgccttcaac
aaggcgcactccgcggcgtacggcgtcatctcctactggacggcctatctcaaggccaac
tacccggccgagtacatggcggcgctgctgaccagcacgcgcgtcgacaaggacaagtcg
gcgatctacctcaacgagtgccgtcgcatgggcatcaaggtgctcccgcccgacgtcaac
gagtcggtctccaacttcgcctccgtgggccccgacatccgcttcggcctgggcgcgatc
cgcaacatcggcgagaacgtcgtcgcgggcatcgtggaggggcgcacgacgggcggcccc
tacgcggacttcaacgacttcctcgacaaggtcccgacgctcgtgtgcaacaagcgcgtg
ctggactcgctcatcaaggccggggccttcgactccctcgggcaccgtcggcgcgcgctg
acgaccgtggcggaggagggcgtcgacctctacatcgacctcaagcggcaggccgcgatc
ggccaggactcgctgttcggcggcggcgacgacgtcttcacgggcggccgggtcgaggtg
cccgagacgatgccggagtgggagaagacgcagctgctcgccttcgagcgcgacatgctc
ggcctctacgtctcggaccacccgctgcagggcctcgagcacgtgctccgggcgagcagc
gactccacgatcggcgacctgctcaccaacaccgatctgcccgacggcagcacgatccgc
atctgcgggctcatcaccggcgtgcagcggcggatgagcaagaagggcgacccctgggcc
tcgatcacgatcgaggacctcgagggcggcatcgaggtcatggtgttcccaggtgcctac
cagctcgcgatgccggtgctcgtgcccgacacgatcgtcgtggtcaagggccgcgtgcgc
cgcaaggacgagggcatcgagctcaacgccctcgaggtcacgatgcccgcgatgggctcc
ggcggccccgagcgtccgctcgtcgtgacccttccggtggcccgctgcaccgccgacacg
atcggcaccttcaagcaggtgctgtcggcccatcccggcatgtccgaggtgcacctgcgg
ctcgtcggcaacgggacgaccaaggtcatgcggctcgacgacagcctgcgtgtggcacag
tcgtcgtcgttgatcgccgacctcaaagagctgctgggtccccattgcctgtcctga
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