Aeromicrobium yanjiei: GEV26_14175
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Entry
GEV26_14175 CDS
T06272
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aef
Aeromicrobium yanjiei
Brite
KEGG Orthology (KO) [BR:
aef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aef03032
]
GEV26_14175
03400 DNA repair and recombination proteins [BR:
aef03400
]
GEV26_14175
Enzymes [BR:
aef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GEV26_14175
DNA replication proteins [BR:
aef03032
]
Prokaryotic type
DNA Topoisomerases
GEV26_14175
DNA repair and recombination proteins [BR:
aef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GEV26_14175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QGG42428
UniProt:
A0A5Q2MID7
LinkDB
All DBs
Position
2894654..2895649
Genome browser
AA seq
331 aa
AA seq
DB search
MVRLRRTSPSSPGWSRVRHGRGFRYLDEDGLPLEPEQIMRCKQLVIPPAWTEVWICSVPN
GHLQAVGTDDAGRRQYLYHPYWRERRDQEKFARMEGFAAALLQNRAAARRDLGGDDMSLE
RVSATAFSLLDLGMFRIGSDRYVEENGSFGLTTLLKQHVHPEGRGLGFSYAAKSGQHVEV
TVRDERVQAVLEQLRRRRGGGDRLLAYKSGRQWKWLDATDVNAYVKERLGPDYSAKDFRT
WRGTTIAALALARSTATSATARKRAAAAAMREVSEHLGNTPAVARSSYVDPRVVDEFENG
VTVGAEHRRVAPGAPTSRTLERQVLRLLRNA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggtccgactccgccgcacgtccccgtcatctcccggttggtcacgggtccgccacggg
cgtgggttccgctacctcgacgaggacgggctgccgctcgagcccgagcagatcatgcgc
tgcaagcagctcgtcatcccgccggcctggaccgaggtgtggatctgctcggtgcccaac
ggtcacctgcaggccgtcggcaccgacgatgcggggcgccgccagtatctctaccacccg
tattggcgcgaacgtcgcgaccaggagaagttcgcccgcatggagggcttcgcggccgcc
ctgctccagaaccgcgctgcggcgcggcgggacctcggcggcgacgacatgtcgctcgag
cgcgtgtccgcgaccgcgttcagcctgctcgacctcgggatgttccgcatcggctcggac
cggtacgtcgaggagaacggcagcttcgggctcaccacgttgctcaagcagcacgtgcac
cccgagggacgcggcctcggcttctcgtacgccgcgaagtccgggcagcacgtcgaggtg
accgtgcgcgacgagcgggtgcaggccgtgctggagcagctgcgccgccgacgtggcggc
ggtgaccggctgctcgcgtacaagagcgggcgacagtggaagtggctcgacgcgaccgac
gtcaacgcgtacgtcaaggagcgcctcggccccgactactcggccaaggacttccgcacg
tggcgcggcaccacgatcgcggcactcgcactggcccgctccaccgccacgtcggcgacc
gctcgcaagcgggccgccgctgccgcgatgcgtgaggtctccgagcacctcggcaacact
cccgcggtcgcccgctcctcatacgtcgaccctcgcgtggtcgacgagttcgagaacggc
gtcacggtgggggccgagcaccgacgcgtcgcgccgggcgcacccacgagccgtactctc
gagcgccaggtgctccgcctcctgcgcaacgcctga
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