Aeromicrobium yanjiei: GEV26_15090
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Entry
GEV26_15090 CDS
T06272
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aef
Aeromicrobium yanjiei
Pathway
aef03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aef00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GEV26_15090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aef03021
]
GEV26_15090
03400 DNA repair and recombination proteins [BR:
aef03400
]
GEV26_15090
Enzymes [BR:
aef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GEV26_15090
Transcription machinery [BR:
aef03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GEV26_15090
DNA repair and recombination proteins [BR:
aef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GEV26_15090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
XS
Motif
Other DBs
NCBI-ProteinID:
QGG42600
UniProt:
A0A5Q2MQK1
LinkDB
All DBs
Position
complement(3074364..3078185)
Genome browser
AA seq
1273 aa
AA seq
DB search
MLDVNFFDQIRIGLATADDIRGWSFGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITKVDEDARHQDLSSLEAKIDLERKQLESRRDNEVNERMQKLEED
LAALEAEGAKADAKRKVKDSAEREAKQRRDRAQREIDRLDEVWSRFKSLKVQDLEGDELL
YREMTYRFGKYFEGYMGAMAIQKRLQDFDLEAEAESLREIIATGKGQKKTRALKRLKVVS
AFLGSNNAPAGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQIHPLVCSAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLSTNNILKPSDGRPVTMPTQDMIIGLYFLTLERSGHIGEGR
AFSSVSEALMAFERHEISLQSHVKIRIDGTIIDTTLGRAIFNQALPDDYPYVNIQVGKKE
LGVIVNDLAERYSKVDVANALDNLKDTGFHWGTRSGVTVSIEDVVTPPRKQEILATYETQ
AAKVQTQFDRGLITEDERRQELIEIWTQATAEVSAEMEKGFDEDNPIWMMVHSGARGNMM
QVRQIAGMRGLVANPKGEIIPRPIKANFREGLSVVEYFIATHGARKGLADTALRTADSGY
LTRRLVDVSQDVIIREEDCGTERGLKQTIATKLDDGRLVAAENVETAAYSRTAATDVTDA
DGKVLVAAGGELGDVEIAELIAAGVEEIKVRTVLTCEAKAGTCAKCYGRSLATGKLVDIG
EAVGTIAAQSIGEPGTQLTMRTFHTGGVAGDDITHGLPRVVELFEARQPKGKAPITESAG
RVVIDDSDKTRKLVVTPDDGSDVLEYPVTKRARLLIQDGDHVEVGQMLTHGTPDPQEVLR
ILGVRRAQEHLVDQVQEVYRSQGVAIHDKHIEIIVRQMLRRVTVIEQGDAQLIPGDLVDR
AHFEEENRRVVAEGGTPASGRPVLMGITKASLAVESWLSAASFQETTRVLTDAAIHGKSD
SLRGLKENIIIGKLIPAGTGLDRYRNIRVEPTEEARQAAYAVTGYGDYDYGFGSADADSV
KLDDFDFTSYDSK
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgacgtgaacttcttcgatcaaatccggatcggtctcgcgaccgccgacgacatc
cgcggatggtcgttcggcgaggtcaagaagcccgagacgatcaactaccgcacgctcaag
cccgagcgtgacggactcttctgcgagaagatcttcggtcccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccgctccaaggtgcgccgtgagcgcatgggccacatcgagctcgccgccccg
gtcacgcacatctggtacttcaagggtgtcccgagccggctcggctacctgctcgacctc
gccccgaaggacctcgagaaggtcatctacttcgcggcgtacatgatcaccaaggtcgac
gaggacgcgcgtcaccaggacctgtcgagcctcgaggccaagatcgacctcgagcgcaag
cagctcgagagccgtcgtgacaacgaggtcaacgagcgcatgcagaagctcgaggaggac
ctcgcggccctcgaggccgagggtgccaaggccgacgccaagcgcaaggtcaaggactcg
gccgagcgtgaggccaagcagcgtcgtgaccgcgcccagcgcgagatcgaccgcctcgac
gaggtgtggagccgcttcaagagcctcaaggtccaggacctcgagggcgatgagctgctc
taccgcgagatgacgtaccgcttcggcaagtacttcgagggctacatgggcgccatggcg
atccagaagcgcctgcaggacttcgacctcgaggccgaggccgagtcgctgcgcgagatc
atcgcgaccggcaagggacagaagaagacccgcgcgctcaagcgcctcaaggtcgtctcg
gcgttcctcggcagcaacaacgcgccggccggcatggtcctcgacgccgtcccggtgatc
ccgccggagctgcgtccgatggtgcagctggacggtggccgcttcgcgaccagcgacctg
aacgatctctaccgccgcgtgatcaaccgcaacaaccggctcaagcgtctgctcgacctg
ggtgctccggagatcatcgtcaacaacgagaagcgcatgctgcaggaggccgtggactcg
ctgttcgacaacggtcgccgtggtcgccccgtcaccggaccgggcaaccgtccgctgaag
tcgatctccgacatgctcaagggcaagcagggtcgcttccgtcagaacctgctcggcaag
cgcgtggactactcgggccgttcggtcatcgtggtcggcccgcagctcaagctccaccag
tgcggtctgcccaagcagatggctctcgagctgttcaagccgttcgtgatgaagcgtctg
gtcgatctcaaccacgcgcagaacatcaagagcgccaagcgcatggtcgagcgcgctcgt
ccggtcgtgtgggacgtcctcgaagaggtcatcaccgagcaccccgtgctgctcaaccgc
gcgcccacgctgcaccgtctgggcatccaggcgttcgagccgcagctcatcgagggcaag
gccatccagatccacccgctcgtctgctcggcgttcaacgccgacttcgacggtgaccag
atggctgtgcacctgccgctgagcgcggaggcgcaggccgaggcccgcgtcctgatgctg
tcgaccaacaacatcctcaagccgtccgacggtcgtcccgtgaccatgcccacccaggac
atgatcatcggcctgtacttcctgacgctcgagcgttcggggcacatcggtgagggtcgc
gcgttcagctcggtctccgaggcactcatggcgttcgagcgccacgagatctcgctgcag
agccacgtcaagatccgcatcgacggcacgatcatcgacacgacgctcggtcgcgcgatc
ttcaaccaggcgctgccggacgactacccgtacgtcaacatccaggtcggcaagaaggag
ctgggtgtgatcgtcaacgatctcgccgagcgctactccaaggtcgacgtggccaacgcc
ctggacaacctcaaggacaccggcttccactggggcacccgctccggcgtgaccgtgtcg
atcgaggacgtcgtgacgcctccgcgcaagcaggagatcctcgcgacgtacgagacgcag
gccgccaaggtccagacccagttcgaccgtggtctgatcaccgaggacgagcgtcgtcag
gagctcatcgagatctggacccaggcgaccgccgaggtctcggcggagatggagaagggc
ttcgacgaggacaacccgatctggatgatggtccactcgggcgcgcgcggcaacatgatg
caggttcgtcagatcgccggtatgcgtggcctcgtggccaacccgaagggcgagatcatt
cctcgtccgatcaaggccaacttccgtgagggcctgtcggtcgtcgagtacttcatcgcg
acccacggtgctcgtaagggactggccgacacggcgcttcgtaccgccgactcgggctac
ctgacccgtcgcctcgtcgacgtcagccaggacgtcatcatccgcgaggaggactgcggc
accgagcgtggtctcaagcagaccatcgcgaccaagctcgacgacggccgtctggtcgcc
gccgagaacgtcgagacggctgcctactcgcgcaccgcggcgaccgatgtcaccgatgcc
gatggcaaggtcctcgtggccgccggcggcgagctcggagacgtcgagatcgcggagctc
atcgcggccggtgtcgaggagatcaaggtccgtacggtcctgacgtgcgaggcgaaggcc
ggcacgtgcgccaagtgctacggtcgctcgctggcgaccggcaagctcgtcgacatcggc
gaggccgtcggcaccatcgcggcccagtcgatcggtgagcccggcacgcagctgaccatg
cgtacgttccacaccggcggtgtggccggtgacgacatcacgcacggtctgccccgcgtc
gtcgagctcttcgaggctcgccagcccaagggcaaggctcccatcacggagtcggccggc
cgcgtcgtcatcgacgactcggacaagacccgcaagctcgtcgtgacgccggatgacggc
tcggacgtgctcgagtaccccgtcacgaagcgtgcgcgcctcctgatccaggacggcgac
cacgtggaggtcggacagatgctgacgcacggcacgcccgatccgcaggaagtcctgcgc
atcctgggtgtccgccgcgcgcaggagcacctggtcgaccaggtgcaggaggtctaccgg
tcgcagggtgtggcgatccacgacaagcacatcgagatcatcgtgcgccagatgctgcgt
cgggtcaccgtcatcgagcagggcgacgcccagctcatccccggcgacctggtcgatcgt
gcgcacttcgaggaggagaaccgccgcgtcgtcgccgagggcggcacccccgcctcgggc
cgtccggtcctcatgggcatcacgaaggcctcgctggccgtcgagtcgtggctgtcggcc
gcctccttccaggagacgacccgcgtcctgaccgacgcagcgatccacggcaagtcggac
tcgctgcgtggcctgaaggagaacatcatcatcggcaagctcatcccggcgggtaccggt
ctcgaccgctaccgcaacatccgggtcgagcccaccgaggaggcccgtcaggccgcctac
gccgtcaccggctacggcgactacgactacggcttcggctcggctgacgccgattcggtc
aagctggacgacttcgacttcacgtcgtacgactccaagtag
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integrated database retrieval system
