Alkalilimnicola ehrlichii: Mlg_0512
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Entry
Mlg_0512 CDS
T00391
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
aeh
Alkalilimnicola ehrlichii
Brite
KEGG Orthology (KO) [BR:
aeh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aeh03016
]
Mlg_0512
Enzymes [BR:
aeh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Mlg_0512
Transfer RNA biogenesis [BR:
aeh03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Mlg_0512
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ABI55866
UniProt:
Q0ABC1
LinkDB
All DBs
Position
560339..560887
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AA seq
182 aa
AA seq
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MDEETPATTRHRVFFALWPDEALRDGLARLARSLRGGRPVPRGHLHLTLAFAGLVTAEQV
ACLQRAAAGVRAPAFTLRLQTLGGFARARVAHVAPDEQDLPPALPELAGQLNRALVACGV
PAERRGFRPHVTLRRDARPPRPRSVSLPEWSVDRFVLVESGDRGRPGPYRVLAEWLLQRS
TE
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagagacacccgccacgacccggcaccgggtcttttttgcgctgtggccggac
gaggccttgcgcgatggcctggcccgcctggcccgcagcctgcgcggcgggcgcccggtg
ccccgcggccacctgcacctcaccctggcctttgccggcctggtgaccgcggagcaggtg
gcttgcctgcagcgggccgccgctggggtgcgtgcaccggcctttacgttgcggctgcag
accctcggcggctttgcccgggcccgggtggcccatgtggcgccggatgagcaggacctg
ccccctgcgctgccggaactggccgggcagctgaatcgggcactggtcgcttgcggcgtg
ccggcggagcgccggggctttcgcccgcacgtcaccctgcgccgtgacgcccgcccgccg
cgtccccgatcggtcagcctgccggagtggtcggtggaccgtttcgtgctggtggaatcg
ggtgaccgggggcggcccgggccttaccgggtgctggccgaatggctgctgcagcggtcc
acggaatga
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