Alkalilimnicola ehrlichii: Mlg_1613
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Entry
Mlg_1613 CDS
T00391
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
aeh
Alkalilimnicola ehrlichii
Pathway
aeh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aeh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mlg_1613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aeh03019
]
Mlg_1613
Enzymes [BR:
aeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mlg_1613
Messenger RNA biogenesis [BR:
aeh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mlg_1613
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
DUF8086
AAA_22
HEM4
Cas3-like_C_2
HI1480
Motif
Other DBs
NCBI-ProteinID:
ABI56959
UniProt:
Q0A878
LinkDB
All DBs
Position
complement(1840434..1841717)
Genome browser
AA seq
427 aa
AA seq
DB search
MSFDSLGLSAVLLRAVAEQGYSKPTPVQAQAIPAILQGGDVMAAAQTGTGKTAGFTLPML
ERLSQNRPEGGRRRVRALILTPTRELAAQVRDSVKTYGGKLPLKTAVIFGGVGMNPQIQT
LRRGVDIVVATPGRLLDHMGQGTVDLSGVEMLVLDEADRMLDMGFIRDIRRVIAAVPKQR
QTLMFSATFSKEIRQLAEGMLRNPTQIEVAARNTAAENVNQRVHPVSRGEKRALLSNLIQ
DGDWRQVLVFTRTKHGADRLARQLDQDGLSSAAIHGNKSQSARTKALAQFKQGRVRVLVA
TDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAGRGGEALSLVCVDEHKLLDGIH
KLLKRPIDQHIVPGFEPDPSERPQPLFKKPAGRGAGGGRRPNGAPAGNRPQGGRRRGGRP
GQSARQG
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgattctctcggtctgtcggccgtgctgcttcgtgctgtcgctgaacagggt
tacagcaaacccaccccggtgcaggcccaggccatcccggccattctgcaggggggcgac
gtgatggcggccgcccagaccggtaccggcaagacggccgggttcaccctgcccatgctg
gagcggctcagccagaaccgcccggagggcgggcgtcgccgggtgcgcgcccttatcctg
acccccacccgcgagctggccgcccaggtgcgggacagtgtgaagacctatggtggcaag
ctgccgttgaagaccgcagtgatcttcggcggcgtgggcatgaacccgcagatccagacc
ctgcgccgcggcgtcgacatcgtggtggccacccccggccggctgctggaccacatgggc
cagggcaccgtggacctttccggggtcgagatgctggtcctggacgaggccgaccgcatg
ctggacatgggcttcatccgcgacatccgccgggtgatcgccgccgtgccgaagcagcgc
cagaccctgatgttctcggccaccttctcgaaggagatccgccaactggccgagggcatg
ctgcgtaaccccacgcagatcgaggtggccgcccgcaacaccgccgccgagaacgtgaac
cagcgggtgcacccggtcagccgcggtgagaagcgcgccctgctcagcaacctgattcag
gatggtgactggcggcaggtgctggtcttcacccggaccaagcacggcgccgatcggttg
gcccggcaactggaccaggacggtctgagctcggcggccatccatggcaacaagagccag
agcgcccgtaccaaggcgctggcccagtttaagcagggccgggtccgggtgttggtggcc
acggacatcgccgcccgcgggctggatatcgaccagctgccccatgtggtcaactacgag
ttgcccaacgtgccggaggactatgtccaccgcatcggccgcaccggccgggccggacgg
ggtggcgaggcgttgtcgctggtctgcgtggacgagcacaagctgctggacggtatccac
aagctgctgaagcggcccatcgatcagcatatcgtgccaggcttcgaaccggatcccagc
gagcggccgcaaccgttgttcaagaagccggccggacgcggtgccggcggcggccggcgg
cccaacggcgcgccggccggcaaccgcccgcaaggcggccggcgccgcggtggccgtccg
ggccagtcggcccgccagggctga
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