Alkalilimnicola ehrlichii: Mlg_1849
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Entry
Mlg_1849 CDS
T00391
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aeh
Alkalilimnicola ehrlichii
Pathway
aeh03030
DNA replication
aeh03430
Mismatch repair
aeh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mlg_1849
03430 Mismatch repair
Mlg_1849
03440 Homologous recombination
Mlg_1849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aeh03032
]
Mlg_1849
03400 DNA repair and recombination proteins [BR:
aeh03400
]
Mlg_1849
Enzymes [BR:
aeh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mlg_1849
DNA replication proteins [BR:
aeh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mlg_1849
DNA repair and recombination proteins [BR:
aeh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mlg_1849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
DUF655
GHMP_kinases_N
HROB
Motif
Other DBs
NCBI-ProteinID:
ABI57193
UniProt:
Q0A7J4
LinkDB
All DBs
Position
complement(2106288..2109836)
Genome browser
AA seq
1182 aa
AA seq
DB search
MSAQSGFVHLNVHSEFSLSDGILRIPELVDAVAGQGMPAVAITDQGNLFGMVKFYKAALA
AGVKPIVGAEIRVEDEEAERDHSALTLLCRDLDGYAALSRLLSLSYQQGRTVDDTPVVQR
AWLEADHEGLIVLSGGKDGDVGKALLAGNTRRAESLARWYAGHFPDAYFLELQRTGRPGD
EDHLHAAVALATELALPVVATNAVRFLAADDYDAHEVRVCIHDGYTLDDPKRPRRYTNQQ
YLRSPAEMGALFSDLPEALENTVEIARRCSLDLTLGENVLPDFPIPEGLTIEEFLHQEAL
RGLEQRLEERGLAEGETEEGVRETYRQRLDWELGIINQMGFPGYFLIVADFIRWAKEHDI
PVGPGRGSGAGSLVAYALAITDLDPLRYDLLFERFLNPERVSMPDFDVDFCMEQRDEVIE
YVARRYGREKVSQIATHGTMAARAVVRDVGRVLGHGYGYVDRIAKLVPFEPGMQLTKAFE
LEPELKALYEKDEEAGPLLSMALKLEGLARNVGKHAGGVVIAPTALTDFSPLYCEPGGEG
LATQYDKDDVEEVGLVKFDFLGLRTLTIIDWTVKAVNALREQRGETPLDIARIPLDDRAT
FDLLKRCQTTAVFQLESRGMKELIKRLQPDSFEDIIALVALFRPGPLQSGMVDDFIDRKH
GRAQVAYPTPELHHDDLEPILKPTYGVILYQEQVMQIAQALAGYSLGAADLLRRAMGKKK
AAEMAKQREIFLKGAQEHGLSEAHAGAIFDLMEKFAGYGFNKSHSAAYALLSYQTAWLKH
HYPAPFMASVLSSDMDNTDKVVIFIEECREMGLTVRPPDVNRSGYRFRAEDEQTIIYGLG
AVKGVGQSALDAIIEERDAHGPFKDLQDLCNRVDLRKVNRRVLEALCRSGSLDSLIPNRA
TGMAWLPEALAAAEQKTRNAAAGQEDLFGLPGDGAAVAEAEEPHFSTPEQAEWDEHDRLA
AEKETLGLFLTGHPIDPYEAELSHLAERRIAQVLAAAGEPGEKPENGRGRRRNGPSVRVV
GLVVSLRTRNTASGGRMASLVLDDRTARMEAMLFPEAYERLRGLIAVDRVLVVQGSLDYD
DFAGGWRITVEQLQDINDARAERLRQVVIELSAAIADNGFADALEETLKPYRQGRCDVHL
DYRGERASGRLRLGDDWRVHPSDDLLRRLERLAGPARVRLEY
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccagagcggtttcgtacacctgaatgtccactcggagttctccctctccgac
ggtatcctgcgtatccccgagctggtggacgcggtggccgggcagggtatgccggcggtg
gccatcaccgatcagggcaacctgttcggcatggtcaagttctacaaggcggcgctggca
gcgggggtcaagcccattgtcggtgccgagatccgggttgaggacgaggaggcggaacgg
gaccactccgcgctcaccctcctgtgccgcgatctggacggctatgccgctctgtccagg
ctgctctcgctgagctaccagcagggccgcaccgtggacgacacccccgtggtccaacgt
gcctggctggaggccgaccacgagggcctcatcgtgctctccggtggcaaggacggtgat
gtgggcaaggccctgctggccggcaacacacgccgcgccgaaagcctggcccgctggtat
gccgggcacttccccgacgcctatttcctggagctgcagcgcaccggccgtcccggcgat
gaggaccacctgcacgccgccgtggcgctggccaccgagctggccttgccggtggtggcg
accaacgccgtgcgcttcctcgctgccgacgattacgacgcccatgaggtgcgggtctgt
atccacgacggctacaccctcgacgacccaaagcgcccgcgccgttacaccaaccagcag
tacctgcgcagcccggcggagatgggggcgctgttttccgatctgcccgaggcgctggag
aataccgtcgagatcgcccggcgctgcagcctggatctgaccttgggcgagaacgtcctg
cccgatttccccatccccgagggattgaccattgaggagttcctgcaccaggaggccctg
cgcgggctcgagcagcggctggaggagcgcggcctggcggagggtgagaccgaggagggc
gtgcgcgagacctaccggcagcggctggactgggagctggggatcatcaatcagatgggc
ttccccggctacttcctgatcgtggccgatttcatccgctgggccaaggaacacgatatc
ccggtgggcccggggcgcggctccggggcggggtcgctggtggcctacgccctggcgatc
accgatctcgatccgctgcgctacgatctgctgtttgagcgctttctcaatcccgaacgc
gtctccatgcccgacttcgacgtggacttctgcatggagcagcgtgacgaggtcatcgag
tacgtggcccggcgctacggccgcgagaaggtgtcgcagatcgccacccacggcaccatg
gccgcccgcgccgtggtgcgcgatgtgggccgggtgctgggccatggctacggctacgtc
gaccgcatcgccaaactggtgcccttcgaaccgggcatgcagctgaccaaggccttcgag
ctggagccggagctcaaggcgctctatgaaaaggacgaggaggccggcccgctgctgagc
atggccctcaagctggagggcctggcccgtaatgtcggtaagcacgccggcggggtggtc
atcgcccccacggcgctgaccgacttctcgccgctctactgcgaaccgggcggtgagggg
ttggccacccagtacgacaaggacgatgtggaggaggtgggcctggtcaagttcgacttc
ctgggcctgcgcacgctcaccatcatcgactggacggtgaaggcggtgaatgccctgcgc
gaacagcggggagagaccccgctggatatcgcccggatcccgttggacgaccgcgccacc
ttcgacctgctcaagcgctgccagaccaccgcggtgttccagttggaatcccgcggcatg
aaggagctgatcaaacgcctgcagcccgacagctttgaggacatcatcgccctggtggcg
ctgttccgccccggcccgctgcagtcgggcatggtggacgactttatcgaccgcaagcac
ggccgggcgcaggtggcctacccgaccccggaactgcaccacgacgacctggagccgatc
ctcaagcccacttacggcgtcatcctctaccaggagcaggtgatgcagatcgcccaggcc
ctggccggttacagcctgggggcggccgatctgctgcgccgggcgatgggcaagaagaag
gcggccgagatggccaagcagcgggagatcttcctcaagggcgcgcaggagcacggcctg
agcgaggcgcacgccggcgccatctttgacctgatggagaagttcgccggttacggcttc
aacaaatcccactccgcggcctacgcactgctctcctaccagaccgcctggctcaagcac
cactacccggcgcccttcatggcctcggtgctctcctcggacatggataacaccgacaag
gtggtgatcttcatcgaagagtgccgggagatggggctcaccgtgcgcccgccggacgtg
aaccgctccgggtaccggttccgcgccgaggacgaacagaccatcatctacggcctcggt
gcggtgaaaggggtggggcagtcggccctggacgccatcattgaggagcgcgacgcccac
ggcccgttcaaggacctgcaggacctgtgcaaccgggtggacctgcgcaaggtgaaccgc
cgggtgctggaggccctctgccgctccggcagcctcgacagcctgatccccaaccgcgcc
accgggatggcctggctaccggaggccctggcggcggccgaacagaagacccgtaacgcc
gccgccggtcaggaggacctgtttggcctgcccggcgacggcgcggccgtggcggaagcg
gaggagccgcatttttccaccccggagcaggcggagtgggatgagcacgaccggctggcc
gccgagaaggagaccctggggctgttcctgaccggccatcccatcgacccctacgaggcc
gaactgtcccatctggccgaacggcgcatcgcccaggtgctggcagcggccggagagccg
ggcgagaagccggagaacggccggggccggcggcgcaacggccccagcgtccgggtggtg
gggttggtggtgtccctgcgtacccgcaacaccgccagcggcgggcgcatggccagcctg
gtgctggatgaccgcaccgcgcgcatggaggccatgctctttcctgaggcctacgagcgg
ctgcgcgggctgatcgcggtggaccgggtgctggtggtccagggcagtctcgattacgac
gacttcgccggcggctggcggatcaccgtggagcagttgcaggacatcaacgacgcccgc
gccgagcggctgcgccaggtggtcattgagctctcggcggccattgcggacaacggcttc
gccgacgccctggaggaaaccctgaagccctatcgccaggggcggtgtgacgtgcatctg
gactaccgtggcgagcgggccagcgggcgcctgcgcctgggtgacgactggcgggtgcac
cccagtgacgacctgttgcgccgtctcgagcgactggcgggcccggcgcgggtgcgcctg
gagtattga
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