Alkalilimnicola ehrlichii: Mlg_2070
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Entry
Mlg_2070 CDS
T00391
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
aeh
Alkalilimnicola ehrlichii
Pathway
aeh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aeh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mlg_2070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aeh03019
]
Mlg_2070
Enzymes [BR:
aeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mlg_2070
Messenger RNA biogenesis [BR:
aeh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mlg_2070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Utp25_C
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ABI57412
UniProt:
Q0A6X5
LinkDB
All DBs
Position
2347046..2348362
Genome browser
AA seq
438 aa
AA seq
DB search
MKNEHLSNTRFDTLGLHDALMDGIKRAGFEYCTPIQAATLPKALEGRDIAGQAQTGTGKS
AAFLLAAMHRLMTVPVEEGKEGPWTLILAPTRELALQIHRDALQLGRYTGLKCAAIYGGT
GYEAQRQQLQEGVDIIIGTPGRVIDFFKQRIFHLKHIEVVILDEADRMFDLGFIADIRYL
MRRMPEPSKRMNMLFSATLSHRVMELAYEHLNDPEVVRIESEQITADKVRQKLYHVSKDE
KIPLLLGLIRQEEAMNRSIIFVNTKRAADRVTGYLLGNDIEAAVISGDIPQKKRESLLKR
FQDGELRFLVATDVAARGLHIEDVSHVINYDLPQDPEDYVHRIGRTARAGASGDAISFAC
EEYVFSLPDIESFIEQRIPAEMPSPEMMVEPKPPKRIQRSRPGGKGGRGRPGGAGNRRRS
GNDRRGGNNGSNGSGGNN
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgaacatctctccaacacccgctttgacaccctgggcctgcacgatgccctg
atggacggcatcaagcgtgcaggcttcgagtactgcacgcccatacaggccgccaccctc
cccaaggcgctggaagggcgcgacatcgccggccaggcccagaccggcaccggcaaatcc
gccgccttcctgctcgccgcaatgcaccggctgatgaccgtaccggtggaggaaggcaag
gaaggcccctggaccctcatcctggcccccacccgggaactggccctgcagattcaccgc
gacgccctgcaactgggccgctacaccggcctcaaatgcgccgccatctacggcggcacc
ggctacgaggcccagcgccagcaactgcaggaaggcgtggacatcattatcggcaccccg
ggccgggtcatcgacttcttcaaacagcggattttccacctcaagcacatcgaagtggtg
atcctcgacgaggccgaccgcatgttcgacctcggcttcatcgccgacatccgctacctc
atgcgacgcatgcccgagccgtccaaacggatgaacatgctcttctccgccaccctctcc
caccgggtgatggaactggcctacgagcacctcaacgaccccgaggtggtccgcatcgaa
tccgagcagatcaccgccgacaaggtccgccagaagctctaccacgtctccaaggacgaa
aagatccccctcctgctcggcctcatccgccaggaggaggcgatgaaccgcagcatcatc
ttcgtcaacaccaagcgggccgccgaccgggtcaccggctacctgctgggcaacgacatc
gaggccgcggtcatctccggcgacatcccgcagaaaaagcgcgaatccctgctcaagcgc
ttccaggacggcgaactgcgcttcctggtggccaccgatgtggccgcccgtgggctgcac
attgaagacgtctcccacgtcatcaactacgatctgccccaggatcccgaggactacgtg
caccggatcggccgcaccgcccgggccggggccagcggcgacgcgatctccttcgcctgc
gaggagtacgtcttctcactgccggacatcgaaagcttcatcgagcagcggatccccgcc
gagatgccctcgcccgagatgatggtcgagcccaagccccccaagcgcatccagcgcagc
cgccccggtggcaagggcggccggggacgccccggcggggcgggcaatcgccgtcgaagc
ggcaacgaccgccggggtggcaacaacggctccaacggaagcggcggcaacaactag
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