| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:aej00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E5E97_02890 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:aej03021]
E5E97_02890 (rpoC)
03400 DNA repair and recombination proteins [BR:aej03400]
E5E97_02890 (rpoC)
Enzymes [BR:aej01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E5E97_02890 (rpoC)
Transcription machinery [BR:aej03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E5E97_02890 (rpoC)
DNA repair and recombination proteins [BR:aej03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E5E97_02890 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(559953..564257)
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| AA seq |
1434 aa
MKDLLKFLKAQTKTEEFDSIKIGLASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMTLRDIERVLYFESYVVIEPGMTNLERSQMLSEEQYLDALEEWGDEFDAKM
GAEAILALLRAIDLEGEVRTMREELDQTNSETKRKKTTKRLKLMEAFLQSGNKPEWMIMT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPT
LRLHQCGLPKKMALELFKPFIYGKLESRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPASGEPIIVPSQDVVLGLYYMTRARINAKGEGMVLSGPKEAEKVYRAG
LADLHARVKVRITEYLRQEDGSLRAHTEMKNTTVGRAILSLILPKGMEYALIDEPKVLTA
AEQADLDANPQNWIKSVSNKALGKKLISRLLNTCYRKQGLKDTVIFADQLMYTGFHYAAL
SGASVGIDDMVIPDAKKDIIAAAEAEVAEIQDQFLSGLVTAGERYNKVIDIWASANERVS
KAMMENLSKERNVNSLGEEEEQASFNSIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSI
IETPIVANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDMVITEDDC
GTTEGLWMTPLIEGGDVVEPLRERVLGRVVADDVIKPGTEDEVLVARNTLLDEQLCDLLE
RNSVDRVKVRSAITCETDFGNCAHCYGRDLARGHLVNKGEAVGVIAAQSIGEPGTQLTMR
TFHIGGAASRAAAESSIQVKNTGSIKLQNAKFVHNSDDKLVITSRSTELTIMDEMGRTKE
SHKLPYGSVLEVKDGQAVNAGETVANWDPHTHPIITEVAGRLHFEHMIDGVTITRQTDEL
TGLSSIVVLDVNERPSAGKEMRPTVKLVDLNGKDVMIPGTDVAAQYFLPGKAIVNLEDGA
NVGVGDAVARIPQESGGTKDITGGLPRVADLFEARQPKEPAILAEISGTISFGKETKGKR
RLVITPTDGGDVYEEMIPKWRNLNVFEGEKVEKGEVLADGPESAHDILRLRGISPVANYI
ANEVQDVYRLQGVKINDKHIEVIVRQMLRKCEILSAGDTDLIEGEQVEVARVKIANRKLV
AEGKTPATFRHILMGITKASLSTESFISAASFQETTRVLTEAAVGGKRDELRGLKENVIV
GRLIPAGTGFAYHHGRINQRAAAARAVGVPQVTADEAQQNLADLLNAAGSFDEE |
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| NT seq |
4305 nt +upstreamnt +downstreamnt
gtgaaagacttactcaagtttttgaaggctcagaccaagaccgaagagtttgacagtatc
aagatcggtctggcctctcctgacatgatccgctcctggtcattcggtgaggtcaaaaag
cctgagaccatcaactaccggactttcaagccggaacgtgatggtctgttctgcgcccgt
atcttcggaccggtgaaggactacgagtgtctgtgcggcaagtacaagcgcctgaaacac
cgtggtgtgatctgtgagaagtgcggcgtagaagtgacccagaccaaggtccgtcgtgag
cgtatgggccacattgagctggccagcccgactgcccacatctggttcctgaagtccctg
ccgtcccgtatcggtctgctgctggacatgaccctgcgtgacatcgagcgcgtgctgtat
ttcgaatcctatgtagtgatcgaacccggcatgaccaacctcgagcgcagccagatgctg
tccgaagagcagtacctggacgcactggaagagtggggcgacgaattcgacgccaagatg
ggtgccgaagcaatcctggcattgctgcgcgccatcgatctggaaggcgaagtgcgcacc
atgcgcgaagagctggatcagaccaactccgagaccaagcgcaagaagaccaccaagcgc
ctgaagctgatggaagccttcctgcagtccggcaacaagccggagtggatgatcatgaca
gtgctgcccgtgctgccgccggacctgcgtccgctggtaccgctggacggcggccgtttc
gcgacctccgatctgaacgatctgtaccgccgcgtgatcaaccgtaacaaccgcttgaag
cgcctgctggacctggctgctccggacatcatcgtgcgcaacgaaaagcgcatgctgcaa
gagtccgtcgatgccctgctggacaacggccgtcgtggtcgtgccatcaccggctccaac
aagcgcccgctgaaatccttggccgacatgatcaagggtaagcaaggtcgtttccgtcag
aacctgctcggtaagcgtgtcgactactccggtcgttccgttatcaccgtaggtccgact
ctgcgtctgcatcagtgcggtctgccgaagaagatggcgctggagctgttcaagccgttc
atctatggcaagctggaatcccgcggtctggcgaccaccatcaaggccgccaagaagatg
gtggagcgcgaagaagctgtcgtttgggacatcctggacgaagtgatccgcgaacacccg
gttctgctgaaccgtgcaccgaccctacaccgtctgggtatccaggcgtttgagccgacc
ctgatcgaaggcaaggccatccagctgcacccgctcgtctgtgccgcctataacgcggac
ttcgatggtgaccagatggcggtccacgtaccgctgaccctggaagcccagctggaagcg
cgtgcgctgatgatgtccaccaacaacatcctgtcgcctgcttccggtgagccgatcatc
gttccgtctcaggacgtggtcttgggtctgtactacatgacccgtgcccgtatcaacgcc
aagggcgaaggtatggtgctgtccggcccgaaagaagccgagaaggtataccgcgccggt
ctggccgatctgcatgctcgcgtgaaagttcgcatcaccgaatacctgcgtcaggaagac
ggttcgctgcgtgctcacaccgagatgaagaacaccaccgttggtcgtgcgatcctgagc
ctgatcctgccgaaaggcatggaatacgcgctgatcgacgagccgaaggtgctgactgct
gcagagcaggctgacctggatgccaacccgcagaactggatcaaatccgtatccaacaag
gcgctgggcaaaaagctcatctcccgtctgctgaacacctgctatcgcaagcagggcctg
aaggacaccgtcatcttcgctgaccagctgatgtataccggtttccactatgcggccctg
tccggtgcttccgttggtatcgatgacatggtcatcccggatgccaagaaagacatcatc
gctgctgcagaagccgaagttgccgagatccaggaccagttcctgtccggtctggtgacc
gcaggcgaacgctacaacaaggttatcgatatctgggccagcgccaacgagcgcgtctcc
aaggccatgatggagaacttgtccaaagagcgtaacgtcaactcgctgggtgaagaagaa
gagcaagcctcgttcaacagcatcttcatgatggccgactctggtgcgcggggttccgca
gcccagatccgtcagctggccggtatgcgtggcctgatggccaagccggatggctccatc
atcgagaccccgatcgtcgcgaacttccgcgaaggtctgaacgtattgcagtacttcatc
tccactcacggtgctcgtaagggtctggcggataccgcactgaagactgcgaactccggt
tacctgactcgtcgtctggttgacgtggcacaggacatggtgatcaccgaggacgattgc
ggcactaccgaaggtctgtggatgactccgctgatcgaaggtggcgacgtggtcgaaccg
ctgcgtgagcgcgtgctgggccgtgtggttgccgatgacgtgatcaagccgggtactgaa
gacgaagtgctggtagcacgcaacaccctgctcgacgagcagctgtgtgacctgctggag
cgcaactccgttgaccgcgtgaaggttcgttctgccatcacctgtgagaccgacttcggt
aactgtgctcactgctacggccgtgatctggcccgtggtcacctggttaacaagggtgag
gctgtcggtgttatcgccgcccagtccatcggtgagccgggtacccagctgacgatgcgt
accttccacatcggtggtgccgcatcccgtgccgctgccgagagcagcatccaggtcaag
aacaccggtagcatcaagctgcagaacgccaagttcgttcacaacagcgatgacaaactg
gttatcacctcccgttctaccgaactgaccatcatggacgagatgggccgtaccaaggaa
agccacaagctgccttacggttccgtgctggaagtgaaagatggccaggccgtgaacgcc
ggtgaaaccgtcgccaactgggatccgcacactcacccgatcatcaccgaagtagcgggt
cgcctgcacttcgaacacatgatcgatggcgtgaccattactcgtcagaccgacgagctg
accggtctctcctccatcgtcgtgctggatgtcaacgagcgtccgagcgccggtaaagag
atgcgtccgaccgttaaactggtcgacctgaacggcaaggacgtgatgatcccgggtacc
gatgtcgccgcccagtacttcctgccgggcaaggcgatcgtgaacctggaagatggtgcc
aacgtgggcgtgggtgacgcggtagcgcgtatcccgcaagagtccggcggtaccaaggac
atcaccggtggtctgccgcgcgttgcggatctgttcgaagcacgtcaaccgaaggaaccg
gcaattctggccgagatctccggtaccatctccttcgggaaagagaccaagggcaaacgc
cgtctggtcatcaccccgaccgatggtggcgatgtctacgaggagatgattccgaagtgg
cgtaacctgaacgtgttcgaaggtgaaaaagttgagaagggtgaagtgctggcggacggt
cctgagtctgctcacgacattctgcgtctgcgcggtatcagcccggtcgccaactacatc
gccaacgaagtgcaggacgtttaccgtctgcaaggcgttaagatcaacgacaagcacatc
gaagtcatcgtgcgtcagatgctgcgcaagtgcgagatcctgagcgccggcgacaccgac
ctgatcgaaggcgaacaggttgaagtggctcgcgtgaagattgccaaccgtaagttggtt
gctgagggcaagaccccggccaccttccgtcacatcctgatgggtattaccaaggcatct
ctgagcaccgagtccttcatctccgcggcttccttccaggaaaccacccgtgttctgacc
gaggcggccgttggcggcaagcgtgacgaactgcgtggcctgaaagagaacgtgatcgtg
ggtcgtctgatcccggctggtaccggctttgcctaccaccacggccggatcaaccagcgt
gccgccgcagcccgtgctgttggtgtgccgcaggtgactgccgatgaagctcagcaaaac
ctggcggatctgctcaacgcagccggcagttttgacgaagagtaa |
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