Aeromonas sp. 2692-1: E5E97_05305
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Entry
E5E97_05305 CDS
T08798
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aej
Aeromonas sp. 2692-1
Pathway
aej03420
Nucleotide excision repair
aej03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E5E97_05305 (uvrD)
03430 Mismatch repair
E5E97_05305 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aej03400
]
E5E97_05305 (uvrD)
Enzymes [BR:
aej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E5E97_05305 (uvrD)
DNA repair and recombination proteins [BR:
aej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E5E97_05305 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
E5E97_05305 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QJT12371
LinkDB
All DBs
Position
1074355..1076526
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSTLLDGLNDKQRDAVAAPRCNLLVLAGAGSGKTRVLVHRIAWLMQVERCSPFSIIAV
TFTNKAAAEMRGRVEKVIGDGVRGMWIGTFHGIAHRLLRAHHLDAGLPQDFQILDSDDQY
RLIRRVLKALNLDEKHWAPRAVMGYINGKKDEGLRPGDIDLYGDPVTRTYQQIYKTYQET
CDRSGLVDFAELLLRAHELWLNKPHILEHYRDRFQNILVDEFQDTNGIQYAWLRMLAGDS
GKVMIVGDDDQSIYGWRGAKIENIQRFLTDYQGAETIRLEQNYRSTANILKAANCVIANN
AERLGKELWTEGAEGEPISLYAAFNEVDEARFVVGRLKDWKEKGGLLADCAILYRSNAQS
RVLEEALMQDAMPYRIYGGLRFFERQEIKDAMAYLRLINNRGDDASFERVVNTPTRGIGD
RTLEILRNNARDQGQNLWQSAKALLNDKVLTGRAGNAVRGFVDLIDALEEQVSLLPLHQQ
ADIAIQHSGLKAMYLAEKGEKSQARVENLDELVTACRQYQRPDELEDMSDLSAFLAHAAL
ESGENQADEYADAVQLMTLHSAKGLEFPLVLLVGVEEGMFPSQQSTEESGRLEEERRLCY
VGMTRAMEKLYICYAESRRIYGREMFHKPSRFIREMPAECLEEIRLRTQVSRPTQYGRFS
QNEVQQSFDASGIKLGQRVLHPKFGEGIVLNFEGVGQQSRVQIQFDDVGAKWLVTAYARL
EAL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcaaccctgctcgacgggctcaatgacaagcaaagagatgccgttgcggcc
ccccgttgcaacctgctggtgctggccggtgccggttcgggcaagacccgggtgctggtg
caccgtatcgcctggctgatgcaggtggaacgttgttcacccttctccatcatcgcggtg
acctttaccaacaaggcggcggccgagatgcgtggccgggttgagaaagtgatcggtgac
ggcgtgcgcggcatgtggatcggcaccttccacggcatcgcccaccgcctgctgcgggcc
caccatctggatgcgggcttgccgcaggatttccagatcctcgactccgacgaccagtac
cgcctcattcgccgggtgctcaaggcgctcaacctcgacgagaagcactgggccccgcgc
gccgtgatgggctacatcaacggcaagaaggatgaagggctgcgccccggcgacatcgac
ctctacggcgaccccgtcacccgcacctatcagcagatctacaagacctatcaggagacc
tgcgatcgctccgggctggtggattttgccgagctgctgctgcgcgcccacgagctgtgg
ctcaacaagccgcacatcctcgagcactaccgcgaccgcttccagaacatcctggtggac
gagttccaggataccaacggcatccagtacgcctggctgaggatgctggcaggggattcc
ggcaaggtgatgatcgtcggcgacgatgaccagtccatctacggctggcgcggcgccaag
atcgagaacatccagcgctttctgaccgactatcagggcgccgagaccatccgcctcgag
cagaactaccgctccaccgccaacatcctgaaagcggccaactgcgtcatcgccaacaac
gccgagcgccttggcaaggagctgtggaccgagggggccgagggtgagccgatttcgctg
tacgccgccttcaacgaggtggacgaagcccgcttcgtggtcggccgtctcaaggactgg
aaagagaaaggcggcctcttggccgattgcgccatcctctatcgctccaacgcccagtct
cgggtgctggaagaggcgctgatgcaggacgccatgccctatcgcatctacggcggcctg
cgcttcttcgagcgccaggaaatcaaggacgccatggcctacctgcgccttatcaacaac
cgtggcgacgacgccagcttcgagcgggtggtcaacaccccgacccgcggcatcggcgat
cgcaccctcgagatactgcgcaataacgcccgggatcagggccagaacttgtggcaatcg
gccaaggcgctgctcaacgacaaggtgctgaccggccgtgccggcaacgcggtgcgcggc
tttgtcgatctcatcgacgcgctggaagaacaggtctccctgctgccgctgcaccagcag
gcggatatcgccatccagcactccggcctcaaggcgatgtatctggcggaaaaaggtgag
aaatcccaggcgcgggtggagaacctggacgaactggtcaccgcctgccgccagtaccag
cgcccggacgagctggaagacatgagcgatctctccgccttcctcgcccacgcagcgctg
gaatccggcgagaatcaggcggacgaatacgccgatgcggtgcagctgatgaccttgcac
agcgccaaggggctggagttccccctggtgctgctggtcggtgtggaagagggcatgttc
cccagccagcaatccaccgaggagtcggggcggctcgaggaggagcggcgcctctgttac
gtcggcatgacccgcgccatggagaagctctacatctgttatgccgagagccgccgcatc
tacggccgcgagatgttccacaaaccgagccgctttatccgcgagatgcccgccgagtgc
ctggaggagatccggctgcgcactcaggtcagccgccccacccagtacggccgctttagc
cagaacgaagtgcagcagagcttcgacgccagcggcatcaagctcggccagcgggtgctc
catccgaaattcggggaagggatcgtgctcaacttcgaaggagttggccagcagagccgg
gtgcagatccagttcgacgacgtcggcgccaagtggctggtgacggcgtatgcgagactg
gaagcgctctga
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