KEGG   Aeromonas sp. 2692-1: E5E97_06160
Entry
E5E97_06160       CDS       T08798                                 
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
  KO
K18765  RNase E specificity factor CsrD
Organism
aej  Aeromonas sp. 2692-1
Brite
KEGG Orthology (KO) [BR:aej00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aej03019]
    E5E97_06160 (csrD)
Messenger RNA biogenesis [BR:aej03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     E5E97_06160 (csrD)
SSDB
Motif
Pfam: EAL GAPES4 GGDEF
Other DBs
NCBI-ProteinID: QJT12524
LinkDB
Position
1235860..1237818
AA seq 652 aa
MDVVGHTERHMKLTTQLVSFITLCVIAAMAMVLLGGVFSFRELGMEMQQKKVNSLVEIID
KQLEVADDHQDLTRWLPTLLRSAHVVELEIRQDKQRIYWFRDVQQPTDESLLIPYHQPMP
HQPGMQADFKLERPFKEFEYSIKAMSGISLGVFIVVFGLWYSIRWLRLQLRGAELLAERA
QLILDNKLTKLAHDPADEWPQPASQALDYLLAELADARKERSRFDNFIRSNAFVDKMTGI
GNRLFFDNRLESAIMEASVMSGGVLLIELAGLEELDPELNGRQSQDLLMEASASIAAFVR
KHNGALQARYAGQVFAVLLPNMSESEMVDGAGQLHKSLQRLHWPEAVNPDTAVYLGAVCY
QAEDSLLKVQEEAELALKSARLQGHTGWFLYEKQLDEEQSSKGTVRWRTLIGRRIEEHGI
DFYVQPVQQERDQVVLQQDLLIRIHDEQGRELQAGVFMPMAEKAGLLLPLDRLVAEQTLG
LLRQRSEQSYPISLTLCAQSLLHREFQRWLFFDLFQLPRSTNERLILQLSEAQVTRHYEA
LKRPLRALRMLGCQLAIDHAGQDVVSTQYIKEFEINFLKLHPSLVREIHTRQVNQMAVRS
LVGGCANTRTRVIAVGVESGDEWKMLRHLGVHAGQGPWFAEPERLVLEPAGA
NT seq 1959 nt   +upstreamnt  +downstreamnt
atggatgttgtcgggcatacggaaaggcacatgaaactgaccactcagcttgtctcgttt
attaccctgtgtgtcattgcggccatggccatggtgctgcttggcggggtgttcagcttt
cgtgagctgggcatggagatgcaacagaagaaggtcaactcgctggtcgagatcatcgac
aagcaactggaggtggccgacgatcatcaggatctcacccgctggctgccgaccctgctg
cgctcggcccacgtggtggagctggagatccgccaggacaagcagcggatctactggttt
cgcgacgtacagcagccgaccgacgagagcctgctgatcccctatcaccagcccatgccc
catcagccgggcatgcaggccgacttcaagctggagcggccgttcaaggagttcgagtac
tccatcaaggcgatgtccggcatctccctcggcgtcttcatcgtggtattcggcctctgg
tactccatccgctggctgcgattgcagttgcggggtgccgagctgctggccgagcgcgcc
cagctgatcctcgacaacaaactcaccaagctggcccatgatccggccgacgagtggccg
cagccggccagccaggccctcgactatctgctggccgagctggcggatgcccgcaaggag
cgcagccgcttcgacaacttcatccgcagcaacgccttcgtcgacaagatgaccggcatc
ggcaaccggctgtttttcgacaaccggctggagagcgccatcatggaggcgagcgtgatg
agcggcggcgtgctgctgatcgagctggccggcctggaggagctggatcccgagctgaac
ggccgtcagagccaggatctactgatggaggcgagtgcctccatcgccgccttcgtgcgc
aagcacaacggtgccctgcaggcccgctatgccggccaggtttttgccgtgctgctgccc
aacatgtcggaaagcgagatggtggatggcgccggccagctgcacaagagcctgcagcgg
ctgcactggcccgaggcggtcaatccagacaccgccgtctatctcggcgcggtttgctat
caggccgaggactccttgctcaaggtgcaggaggaggcggagctggcgctcaagagcgcg
cggctgcagggccacaccggctggttcctctacgagaaacagctggacgaggagcagagc
agcaagggcacggtgcgctggcgtaccctgatcggccggcgcatcgaagagcacggcatc
gatttttatgtgcaaccggtgcagcaggagcgggatcaggtggtgttgcagcaggatctg
ctgatccggatccacgacgagcaggggcgggagctgcaggccggcgtcttcatgccgatg
gcggagaaggcggggctgttgctgccgctggatcggctggtggcggagcagaccctcggc
ctgctgcgccagcgctccgaacagagctaccccatcagcctgaccctctgcgcccagagc
ctgctgcaccgggagtttcagcgctggctgttcttcgatctgttccagctgccgcgcagc
accaacgagcgcttgatcctgcaactctccgaggctcaggtcacccgccactacgaggcg
ctcaagcggccgctgcgggcgctgcgcatgctgggctgccagctggccatcgatcatgcc
ggccaggatgtggtgagcacccagtacatcaaggagttcgagatcaacttcctcaagctg
caccccagcctggtgcgcgagatccatacccgccaggtcaaccagatggcggtgcgcagc
ctggtggggggctgtgccaacacccgcacccgggtcatcgccgtgggggtggagagcggc
gacgagtggaagatgctgcgccacctcggggtgcacgccgggcagggcccctggtttgcc
gagccggaacggctggtgttggagccggccggcgcctga

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