Aeromonas sp. 2692-1: E5E97_16610
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Entry
E5E97_16610 CDS
T08798
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aej
Aeromonas sp. 2692-1
Brite
KEGG Orthology (KO) [BR:
aej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aej03016
]
E5E97_16610 (rnd)
Enzymes [BR:
aej01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
E5E97_16610 (rnd)
Transfer RNA biogenesis [BR:
aej03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
E5E97_16610 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DNA_pol_A_exoN
CCB2_CCB4
Motif
Other DBs
NCBI-ProteinID:
QJT14392
LinkDB
All DBs
Position
complement(3480388..3481527)
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AA seq
379 aa
AA seq
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MALINAQAQMHYQLISQQAELDQYLASLADVPLAIDTEFVRTRTYYPQLGLFQIYDGEHL
ALLDPLTLDLSSLWQRLGRAGQIAILHASGEDLELIQHQAGHLPNQMHDTQLAAAFLGYG
VSVGFGALVNEFLAVELEKDQARTDWLARPLTPRQLEYAAADVFYLLPLYEKVMAKLHES
GKFAWFEQECQNHSARKTQTSDPRQAYLDIVNAWQLGRRELAILRELAAWRQQEAVRRDL
ALNFVVKELHLFKVAERRPTSLRDLNELGLAPIEIKIHGKRMLDIVAAAQQSDPDSWPEP
IRRLVDYPQYKAELKRIKGMVEEKAKASNIPPELVASKKIIHQYFTWSWRMSDEERARAD
KPMLLQGWRHELVGHLLAQ
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
ttggccctgatcaacgcgcaggcacagatgcactatcaactcatttcacagcaagccgaa
ctggatcagtatctcgcctccctggccgacgttcccctggccatcgatactgaattcgtt
cgcacccgcacctactatccccagctgggcctgttccagatctatgacggtgagcatctg
gcactgctggatccgctgaccctggatctctcctccctctggcaacggctcggccgggca
gggcagatcgccatcttgcacgcctccggtgaagatctggagcttatccagcatcaggcg
ggccatctgcccaaccagatgcacgacacccagctggccgccgccttcctgggttacggg
gtatcggtcggttttggcgccctggtcaacgagtttctcgcggtggagctggaaaaggat
caggcccgcaccgactggctggcacgcccgcttacacctcgccagctcgagtacgcggcg
gccgacgtgttttatctgctgccgctctacgagaaagtgatggccaagctgcatgaaagc
ggcaagttcgcctggttcgagcaggagtgccagaaccactccgcccgcaagacccagacc
agcgatccccgccaggcctatctcgacatcgtcaatgcctggcaactggggcgtcgtgag
ctggcgatcctgcgtgagctggccgcctggcgtcagcaggaggcggtgcgccgtgatctg
gccctcaacttcgtggtcaaagagctgcacctgttcaaggtggcggagcgcagacccacc
tccttgcgcgatctgaacgagctagggctggcccccatcgagatcaagatccacggcaag
cggatgctcgacatcgtggccgcggcccagcagagcgatcccgacagctggcccgagccc
attcgccggctggtggactacccccagtacaaggccgagctcaagcgcatcaaagggatg
gtggaagagaaggccaaggccagcaacattccgcccgagctggtggccagcaagaagatc
attcaccagtacttcacctggagctggcgcatgagcgacgaagagcgcgcccgggccgac
aagccgatgctgctgcagggctggcgccatgaactggttggccacttgctggcacagtga
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