Aeromonas sp. 2692-1: E5E97_17360
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Entry
E5E97_17360 CDS
T08798
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
aej
Aeromonas sp. 2692-1
Brite
KEGG Orthology (KO) [BR:
aej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aej03032
]
E5E97_17360 (hupB)
03036 Chromosome and associated proteins [BR:
aej03036
]
E5E97_17360 (hupB)
03400 DNA repair and recombination proteins [BR:
aej03400
]
E5E97_17360 (hupB)
DNA replication proteins [BR:
aej03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
E5E97_17360 (hupB)
Chromosome and associated proteins [BR:
aej03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
E5E97_17360 (hupB)
DNA repair and recombination proteins [BR:
aej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
E5E97_17360 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QJT14514
LinkDB
All DBs
Position
complement(3649371..3649643)
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AA seq
90 aa
AA seq
DB search
MNKSQLIDKIADGADISKAAAGRALDAFIDAVGEALKEGDQVALVGFGTFAVRERAARSG
RNPQTGATIEIAAGKVPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctcaactgattgacaagattgcagacggtgctgatatctccaaagccgct
gctggccgtgcgctggatgctttcattgacgccgtgggtgaagccctgaaagagggtgac
caggttgctctggtaggtttcggtactttcgccgtgcgcgagcgtgctgcccgttctggc
cgtaacccgcaaactggcgcgaccatcgaaatcgccgctggtaaagttcctgccttcaaa
gccggtaaggccctgaaagacgctgtcaactaa
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