Aeromonas sp. 2692-1: E5E97_22295
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Entry
E5E97_22295 CDS
T08798
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aej
Aeromonas sp. 2692-1
Pathway
aej03410
Base excision repair
aej03430
Mismatch repair
aej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E5E97_22295 (recJ)
03430 Mismatch repair
E5E97_22295 (recJ)
03440 Homologous recombination
E5E97_22295 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aej03400
]
E5E97_22295 (recJ)
DNA repair and recombination proteins [BR:
aej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
E5E97_22295 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
E5E97_22295 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
E5E97_22295 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
bHLH_IRO3
Motif
Other DBs
NCBI-ProteinID:
QJT15373
LinkDB
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Position
complement(4733507..4735237)
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AA seq
576 aa
AA seq
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MPLQIRRRPRVDDSHLPATLHPLLRQIFASRGVEDPALLERSASQLLPPQRLFGMAQAVP
LLAEALTAQKRILIVGDFDCDGATSSALCVLALRAMGGRHIDFLVPNRFEFGYGLTPEIV
ELAVARGAEFLITVDNGISSIAGVAAAKAAGMQVLVTDHHLPGQELPDADAIVNPNQHGC
DFPSKSLAGVGVAFYLMAALNTQLRQSGWYERQGLRVPNVADYLDLVALGTVADVVALDG
NNRILVHQGLQRIRAGRCRPGIQALVDVSGRDGRRLCAADLGFALGPRLNAVGRLDDMSL
GVACLLSEDINLARQLASEMDSLNQERKEIEQGMQQEALATLEQIRFRDGEVPSGIVLHR
DEWHQGVVGLVASKVKEKYYRPVIAFAESSETELKGSGRSIPGVHLRDALELLDTRHPGL
MGKFGGHAMAAGLTLPKANIEAFGRAFEAIIGELVTPELLTGVLLTDGELLPDELSLELA
ELIRASGPWGQAFPEPLFDGEFVLVQQRLVGEKHLKMMLTTDSGHAVDAIAFGVDLQRWP
DASVKRVRLVYRLDVNEWRGNRSVQLLVEHLEAAGL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgcaaatccgtcgtcgtccgcgagttgatgattcccatctgcccgccaccctg
cacccgctgcttcgtcaaatcttcgccagccgcggggtcgaagatcccgctctgctggag
cgcagcgccagccagctgctgccgccccagcgtctgttcggcatggcgcaggcggtgccg
ctgctggccgaggcgttgacggcgcaaaaacgcattctcatcgtcggtgactttgactgc
gacggcgccaccagctcggcgctgtgcgtgctggccctgcgcgccatgggcggtcgtcac
atcgattttctggtgcccaaccgcttcgagttcggttatggcctcacccctgagatcgtc
gagctggcggtggcccgcggcgccgagtttctgatcacggtggacaacggcatctccagc
atcgccggggtggcggcggccaaggcggccggcatgcaggtactggttaccgatcaccat
ttgccgggccaggagctgcctgacgccgatgcgatagtgaaccccaaccagcatggctgc
gacttcccctccaagtcgctggccggggtcggggtcgccttctatctgatggcagccctc
aacacccagctgcgccagagcggctggtatgagcgtcaggggctgcgcgtccccaacgtg
gcggattacctcgatctggtggcgctcggcaccgtggccgacgtggtggcgctcgatggc
aacaaccgcatcctggtccatcagggcttgcagcggatccgggccggccgttgtcgcccc
ggcatccaggcgctggtggacgtgtcgggccgcgacggtcgtcgcctgtgcgccgccgat
ctcggctttgcgctggggccgcgcctcaacgcggtgggccggctcgacgacatgtcgctc
ggggtcgcctgtctgctgagcgaggacatcaatctggcgcgccagctcgcctccgagatg
gacagcctcaaccaggagcgcaaggagatagagcaggggatgcagcaggaggcgctcgcc
accctggagcagatccgttttcgcgacggcgaggtgccctccggcatagtgctgcaccgg
gacgagtggcatcagggggtggtggggctggtggcctccaaggtgaaggagaagtactac
cgcccggtcatcgcgtttgccgagagcagcgagaccgagctcaagggctccgggcgctcc
atcccgggggtgcacctgcgcgatgcgctggaactgctcgatacccgccaccccggcttg
atgggcaagtttggcggccacgccatggcggccgggctgaccctgcccaaggccaatatc
gaggccttcggccgtgccttcgaggcgatcatcggcgagttggtgacccctgagctgttg
accggggtgctgctcaccgatggcgagctgctgcccgatgaactgagtctggagctggcg
gagctgatccgcgcctccggcccctggggtcaggccttccccgagccgctgtttgatggc
gaattcgtgctggtgcagcagcgactggtgggggagaagcacctcaagatgatgttgacc
acggattccggccacgcggtggatgccatcgcctttggcgtcgacttgcagcgctggccc
gatgcctcggtgaagcgggtgcggctggtctaccggctcgacgtcaacgagtggcgcggc
aaccgcagcgtgcagctgctggtggagcatctggaggcggccggcctctga
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