Aeromonas encheleia: NCTC12917_00146
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Entry
NCTC12917_00146 CDS
T06531
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ael
Aeromonas encheleia
Pathway
ael03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ael00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12917_00146 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ael03019
]
NCTC12917_00146 (recQ_1)
03400 DNA repair and recombination proteins [BR:
ael03400
]
NCTC12917_00146 (recQ_1)
Enzymes [BR:
ael01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC12917_00146 (recQ_1)
Messenger RNA biogenesis [BR:
ael03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC12917_00146 (recQ_1)
DNA repair and recombination proteins [BR:
ael03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC12917_00146 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
VEG94676
LinkDB
All DBs
Position
1:154699..156534
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AA seq
611 aa
AA seq
DB search
MTAVADTQPDFQPESPLALLQAVFGYQQFRPGQLEIIEQIVAGRDALVLKPTGGGKSLCF
QIPALLRPGLGVVVSPLISLMKDQVDSLRANGVAAVYINSALSREEMIQNFAAMRRGEIK
LVYVSPERLLQHEFLDRLAELPLGLFAIDEAHCVSQWGHDFRPEYAALGRLKQWFPQVPV
VALTATADEATRSDMLHRLELNDPFIHTASFDRPNIRYSLVEKFKAAEQLLRYVQSQKGN
CGIVYCSSRNRVEEVAERLSRHGCKAAPYHAGLPLEQRLRTQDAFLKDDVEIVVATVAFG
MGIDKPNVRFVVHYDIPKNIESYYQETGRAGRDGTPAEALLLYDPADIGRVRRLLDNIEN
PQQLQVEQYKLNVMAAFAEAQTCRRQVLLNYFGEYNDKPCGNCDICLDPPKSYDGTEDAQ
KALSCVWRVGQNFGVGYVVEVLRGSLNQRIKDHGHDKLSTYGIGKDQSHEYWMSVIRQLI
HKGLLTQNITRNLVLQLTEAARPVLRGEVPLELAVPRLQPISSRKEKRNGLLDSANYDKR
LFKVLRNLRKQIAEEEEVPPYVVFNDATLVEMAQLMPMTEDEMLAVNGVGHRKLERFGEA
FMDLIIEYCRR
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgttgccgacacccagcccgactttcaaccagagagtccgcttgccctgctg
caggcggtcttcggctaccagcagtttcggccgggccagctggagatcatcgagcagata
gtggcggggcgcgatgccctggtgctcaagcccaccggtggcggcaagtcgctctgcttc
cagatcccggcgctgctgcgccctggcttgggcgtggtcgtatccccgcttatctccctg
atgaaggatcaggtcgacagcctgcgcgccaacggcgtggccgcggtctacatcaactcg
gccctgagccgggaggagatgatccagaacttcgccgccatgcgccgcggcgagatcaag
ctggtctatgtctcgccggagcggctgctgcagcacgagtttctggaccggctggcggag
ctgccgctcggcctgttcgccatcgacgaggcgcactgcgtctcccagtggggccacgat
tttcggccggaatacgcggcgctggggcgactcaagcagtggtttccccaggtacccgtg
gtggcgctcaccgccaccgccgacgaggcgacccgcagcgacatgctgcaccggctggag
ctcaatgacccctttatccacaccgccagcttcgatcgtcccaacatccgctacagcctg
gtggagaagttcaaggcggcggagcagctgctgcgctacgtgcagagccagaagggcaac
tgcggcatcgtctattgctccagccgcaaccgggtggaggaggtggccgagcggctctcc
cgccacggctgcaaggcggcgccttatcatgccggcctgccgctggagcagcggctgcgc
acccaggatgccttcctcaaggatgatgtcgagatagtggtggcgacggtggcgttcggc
atgggcatcgacaagccgaacgtgcgcttcgtggtgcactacgacatccccaagaacatc
gaatcctactatcaggagacggggcgggccggccgtgacggcaccccggccgaggcgctg
ctgctgtacgatcccgccgacatcggccgggtgcggcggctgctcgacaacatcgagaac
ccgcagcagctgcaggtcgagcagtacaagctgaacgtgatggcggccttcgccgaggcc
cagacctgccgtcgtcaggtgctgctcaactacttcggcgagtacaacgacaagccgtgc
ggcaactgcgacatctgcctggatccccccaagagctacgatggcaccgaagacgcccag
aaggcgctctcctgcgtctggcgggtggggcagaacttcggggtaggttatgtggtcgag
gtgctgcgcggctcgctgaaccagcgcatcaaggatcacggccacgacaagctgtcgacc
tacggcatcggcaaggatcagagccacgagtactggatgagcgtcattcgccagctgatc
cacaagggcttgctgacccagaacatcacccgcaacctggtgctgcaactgaccgaggcg
gcccgcccggtgctgcgcggcgaggtgccgctggaactggcggtgccacggctgcagccc
atctccagtcgcaaggagaagcgcaatggcctgctcgacagcgcgaactacgacaagcgg
ctgttcaaggtgctgcgcaacctgcgcaagcagatcgccgaagaggaagaggtgccgccc
tacgtggtgttcaacgacgcgaccctggtggagatggcccagctgatgccgatgacggaa
gacgagatgctggccgtcaacggggtggggcaccgcaagctggaacgcttcggtgaggcc
ttcatggacctcatcatcgagtattgccggcgctag
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