Aeromonas encheleia: NCTC12917_00698
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Entry
NCTC12917_00698 CDS
T06531
Symbol
rhlE_1
Name
(GenBank) DEAD box family ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ael
Aeromonas encheleia
Pathway
ael03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ael00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12917_00698 (rhlE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ael03019
]
NCTC12917_00698 (rhlE_1)
Enzymes [BR:
ael01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC12917_00698 (rhlE_1)
Messenger RNA biogenesis [BR:
ael03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC12917_00698 (rhlE_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
VEG95201
UniProt:
A0A448KSG7
LinkDB
All DBs
Position
1:724730..725950
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AA seq
406 aa
AA seq
DB search
MTFNELALAPALLAALPADLHTPTRIQQLAIPVALAGQDLLALAQTGSGKTLAFGLPLLQ
RLDSTSDRVQGLVLVPTRELATQVSAALQGGAEALGLRVLTLCGGVAQEQQQAELALGPQ
LLVATPGRLRDLLAQRLLGLSNLRALVLDEADRLLEMGFWPDIQWLMNAMPAQRQNLLFS
ATLPTELESLATGLLTNPVRIEADPLNGLVSEIEERLYLVNKSGKVPALIGLLKEQDWPQ
VLVFISARDDADGVARKLAKAGIAVAALHGDKDQAVREQALADFKAGKVRVLVATDLMAR
GIHVEALPVVINLDLPASAPVYVHRIGRTARAGRKGLAMSLVCHGETETLAAIRTLTGRE
LALAELAGFPVTDQPASGEGKRAPRDKQANRRTANKRSVKQFKGKA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgacctttaacgaactcgccctagctcccgccctgctggccgccctgcctgccgacttg
cataccccgacccgcatccagcaactagccattccggtggcgctggcggggcaggatctg
ctggcgctggcccagaccggcagcggcaagaccctggcgttcggtctgccgttgctgcaa
cggctggactcgacctccgatcgggtgcaggggctggtgctggtgccgacccgcgagctg
gccacccaggtgagcgccgcgctgcagggaggtgccgaggcgctggggctgcgtgtcctg
accctgtgtggcggggtggcgcaggagcagcaacaggccgagctggcgctggggccgcaa
ctgctggtggcgaccccggggcggctgcgcgacttgctggcccagcgcttgctggggttg
agcaacctgcgtgcgctggtgctggatgaggcggatcgcctgctggagatgggcttctgg
cccgatatccagtggctgatgaacgccatgcctgcgcagcggcagaacctgctgttctcc
gccaccctgccaaccgagctggagagcctggccaccggtctgctgacgaacccggtgcgc
atcgaggcggatccgctcaacggcctggtgagcgagatcgaggagcggctctatctggtc
aacaagagcggcaaggtgccggcgctgatcggcttgctcaaggagcaggattggcctcag
gtgctggtgtttatcagcgccagggacgatgccgacggggtggccaggaagctcgccaag
gcgggtatagcggtggcggccctgcatggggacaaggatcaggcggtgcgggagcaggcg
cttgccgactttaaggcgggcaaggtacgggtgctggtggccacggacctgatggcgcgt
ggcatccatgtggaggcgctgcccgtggtgatcaacctggacctgcccgccagcgccccc
gtctatgtgcatcgcatcggccgcaccgcccgcgccgggcgcaaggggctcgccatgtcc
ctggtctgccacggcgagaccgagaccctcgccgccatccgcaccctgaccggccgtgag
ctggcgctggccgaactggccggcttcccggtgaccgaccagcccgccagcggggagggc
aagcgcgcccccagagacaagcaggcgaatcgccgcaccgccaacaagcgcagcgtcaag
cagttcaagggcaaggcgtga
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