Aeromonas encheleia: NCTC12917_03052
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Entry
NCTC12917_03052 CDS
T06531
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ael
Aeromonas encheleia
Brite
KEGG Orthology (KO) [BR:
ael00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ael03400
]
NCTC12917_03052 (sbcC)
DNA repair and recombination proteins [BR:
ael03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC12917_03052 (sbcC)
Archaeal homologous recombinant proteins
NCTC12917_03052 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
ABC_tran
AAA_21
ABC_ATPase
GTP_EFTU
MeaB
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
VEG97451
UniProt:
A0A3S4WY60
LinkDB
All DBs
Position
1:complement(3297282..3301025)
Genome browser
AA seq
1247 aa
AA seq
DB search
MKILSLAGENLASLTGTFAIDFTRGALGAAGLFAITGNTGAGKSTLLDAICLALYDEMPR
FIANRKNVEKIGRADEDEKEKLTANDVKNILSRGHASGFAEVQFRGCDGRIWLARWAVRR
ARNRSEGRFQAQERSLTDVVTGQIFSGSKRELQERIDELVGLSWEQFRRAVILPQGEFAA
FLKSGADERSALLERMTGTELYSAISVQTHERARAEQQTLAAIGQRLGDVALMDEATREH
WVTEQQRLSTSLKHEQQQRQLLQDLRDLNDRIAALRLACQEGQTALADAEAAHAQAAPER
EEFGRAEQAQVARADHDELARLDQEVQQQELLVGQLGPELELSSQAQQQAALREQQLLAD
KLAAEREWGALQPELKRAQDLDTRIREKAGQLQEIQQQGAQARTLQLQLQQEWQQQCERA
QALEDRRRQWASWLEERKTLAPLARQWQPLLAAMQDWAENKALLQRLLQSHEHKSHALRD
LQARLEQGQQERDHWQQERARLQLQHDQVQAQEWDAQVARAQELRQSRTEQLARVRQLLE
LAQAGRNHSEQQQRLWQEIGMLEQQLARLAAQHDELEPALARLGTQREEARHALEQARAV
ASFEQHRHVLQEGAPCPLCGAEEHPYRQSQPQVAGILAQLAERVRQLDLDWERLHHQHIQ
GESEGVELARQLAARQQHQPELAARSEQLSQRWSLLGGRGLPPRQSPVEWAELQAELLAQ
GEALDHELAAGQQQLQQAQQGQQQLARLREQLAQLNVRYQQCEQQWHEDERQKVAWEAEL
KALAEQEITLRQRLAQGEARLDQQMGAEPWRQWIEGERWQEWQQSCEAYLQGQGEWEQLG
NELASLTPLLSAQEVRVQGQNALLHKLERDYKEGEQQRQGLLASREACLDGRAIALVEHE
WQQRLQQATSRLEEAVTALRAARERQTELRTRLTHLEQDRQLSSRRRREVQGRWAAQASA
LGIAEYDLRRLLAISPDELKVRRAALQRLEDALTEARTRLGERQRAQAQEEAKLERYREH
HGELTALSTEELNQRLTTSTALCRELEEQLFQCKSTLAQAETAALKAGSLQAELACQQGV
VDHWQQLSELIGSASGAKFRTFAQSLTLERLLLEANAQLAELSPRYRLERVPGTDLALQV
VDLDMGDEVRSVDSLSGGESFLVSLALALALSSLSSRQTQVESLFIDEGFGTLDPDSLDL
ALSSLDSLQAAGRQIGVISHVQTLVERIGVQIRVEALGGGESRVVLP
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttgtctctcgccggtgagaatctggccagcctgaccggcaccttcgccatc
gacttcacccgtggcgccctgggggccgctgggctctttgccatcacgggcaataccggg
gcgggcaagagcaccctgctcgacgccatctgcctcgcgctctatgacgagatgccgcgc
tttattgccaatcgcaagaatgttgaaaaaattggccgagctgatgaagacgaaaaagaa
aaattaacagctaacgatgttaaaaatatcctcagccgtggtcatgccagcggctttgcc
gaggtgcagtttcgcggctgtgacggtcgcatctggctggcacgctgggcggtgcggcgg
gcccgcaaccgctcggaggggcgctttcaggcccaggagcgcagcctgaccgacgtcgtt
accggccagattttctccggcagcaagcgggagttgcaggagcgcatcgatgagctggtg
ggcctctcctgggagcagttccgccgggcggtgatcctgccccagggggagttcgccgcc
ttcctcaagtcgggcgccgacgagcgctcggcgctgctggagcggatgacgggcaccgag
ctctactccgccatctcggtacagacccatgagcgggcccgggccgagcagcagacgctc
gcggccataggccaacggctcggcgacgtggcgctgatggacgaggcgacccgcgagcac
tgggtcaccgagcagcagcgcctctccaccagcctcaagcacgagcagcagcagcgtcag
ctgttgcaggacttgcgcgacctcaacgatcgcatcgccgccctgcgtctggcctgtcag
gaggggcagaccgcactcgcggacgccgaggcggctcatgcccaggcggccccggagcgg
gaggagtttggccgcgccgagcaggcccaggtggcccgcgccgatcacgacgagctggcc
cgcctcgaccaggaggtgcaacagcaggagctgcttgtcggccagttgggacccgagctt
gagctgtcctcgcaggcgcagcaacaggccgccctgcgtgagcagcagttgctggcggac
aagctggccgccgagcgggagtggggagccctgcaacccgagctcaagcgggcacaggat
ctcgatacccgcatccgggagaaggccggccagttgcaggagatccagcagcagggcgcg
caggcgaggaccctgcaactccagctgcaacaggagtggcagcagcagtgcgagcgggcg
caggcgctcgaggatcgccgccggcaatgggcgagctggctcgaggagcgcaagacgctg
gccccgctggcacgccagtggcaacccctgctggcggccatgcaggactgggccgagaac
aaggcgctgctgcagcgcttgctgcagagccatgagcacaagagtcatgccttgcgcgat
ctgcaggctcgcctcgagcaggggcaacaggagcgtgaccattggcagcaggagcgtgca
cgtctgcagctgcaacacgatcaggtgcaggcgcaggagtgggacgcccaggttgccagg
gcgcaggagctacgtcagtcccgcaccgagcagctggcacgggtgcggcagttgctggag
ctggcacaggcgggtcgcaatcacagcgaacagcagcagcgattgtggcaagagatcggc
atgctcgagcagcagctggcccggctcgccgcccagcacgatgagctggagcccgccttg
gcgcggctcggcacccagcgggaggaggcgcgccatgccctggagcaggcccgcgccgtg
gccagtttcgagcagcatcgtcacgtgctccaggagggggctccctgcccgctctgcggc
gccgaggagcatccctatcgccagagccagccccaggtggctggcatactggcgcagctg
gccgagcgcgtccgtcagctggatctcgactgggagcgactccatcatcagcacatccag
ggggagagcgaaggggtcgaactggcccgccaactggccgcccgccagcagcatcagccc
gagctggcggcgagatccgaacagctgagccagcgctggtcactgctgggagggcgtggc
ctgccaccgcgccagagcccggtggagtgggccgagctgcaggccgagctactggcccag
ggggaggctctggatcacgagctggcggccggccaacagcagttgcagcaggcccagcag
gggcagcagcagctggcgaggctgcgggagcaactggcccaactcaacgtccggtatcag
cagtgtgagcagcagtggcacgaagacgagcgccagaaggtagcctgggaggccgagctg
aaggcgctggccgagcaggagatcaccctgcgccagcgtctggcacagggggaggccagg
ctcgatcagcagatgggggcagagccctggcgccagtggattgagggtgagcgctggcag
gagtggcagcagagctgcgaggcctatctgcaggggcagggagagtgggagcaactaggc
aacgagctcgccagcctgacccccctactgagcgcccaggaggtacgggtgcagggccag
aacgcgctgctgcacaagctggagcgcgactacaaggagggcgaacagcagcgccaggga
ctgctggccagccgcgaggcctgtctcgatggccgcgccatcgccctggtcgagcacgaa
tggcagcagcggctgcagcaggcgaccagccggctcgaggaggcggtgaccgccctgcgg
gccgccagggagcgacagaccgagctcaggacccggctcactcacctcgagcaggacagg
cagctgagcagccggcggcggcgcgaggtgcaggggcgttgggcggcgcaggccagtgcg
ctcggcattgccgaatatgatctgcgccggctgctggccatcagcccggatgagctcaag
gtgcggcgcgccgccttgcagcggcttgaggacgccctgaccgaggccagaacccggctc
ggggagcgccagcgggcgcaggcgcaggaggaagccaagctggagcgttaccgcgagcat
catggggagctgaccgcgctctccaccgaggagctgaaccagcgcctcaccaccagcact
gcgctgtgccgcgagctggaggagcagctgttccagtgcaagagcaccctggcccaggcc
gagacggcggcgctcaaggcggggagcctgcaggcagagttggcctgccagcagggggtg
gtggatcactggcaacagttgtctgagctgatagggtcggccagcggtgccaaattccgc
accttcgcccagagcctcaccctggagcgtttgctgctggaggccaatgcccagctcgcc
gagctgtcgccgcgctaccggctggagcgggtgcccggcaccgatctggcgctgcaggtg
gtggatctcgacatgggggacgaggtgcgttcggtggactccctctccggcggcgagagc
ttcctggtgtcgctggcgttggcgctggcgctctccagcctctcctcccgccagacccag
gtcgagtcgctgttcatcgacgagggattcggcaccctggatccggacagcctggatctc
gcgctctccagcctcgactccttgcaggcggcgggccgccagatcggggtcatctcccac
gtccagaccctggtggagcgcatcggtgtgcaaataagggtcgaggccctcggcggcggc
gagagccgggtagtcttgccctga
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integrated database retrieval system
