Aeromonas encheleia: NCTC12917_03196
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Entry
NCTC12917_03196 CDS
T06531
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ael
Aeromonas encheleia
Pathway
ael03030
DNA replication
ael03430
Mismatch repair
ael03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ael00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC12917_03196 (dnaE)
03430 Mismatch repair
NCTC12917_03196 (dnaE)
03440 Homologous recombination
NCTC12917_03196 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ael03032
]
NCTC12917_03196 (dnaE)
03400 DNA repair and recombination proteins [BR:
ael03400
]
NCTC12917_03196 (dnaE)
Enzymes [BR:
ael01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC12917_03196 (dnaE)
DNA replication proteins [BR:
ael03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC12917_03196 (dnaE)
DNA repair and recombination proteins [BR:
ael03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC12917_03196 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
VEG97590
LinkDB
All DBs
Position
1:complement(3465524..3469003)
Genome browser
AA seq
1159 aa
AA seq
DB search
MAEPRFIHLRVHSDFSMVDGLQKIGPIASAAAANDMPALALTDQMNMCGLVRFYGSAHGK
GIKPIVGADFWVQSEELGDEQFRLTLLAMDNDGYQNITLLISRGYQRGHVQGRPVIDKSW
LAEHAKGVIVLSGGREGDLGKFMLKGNRQMVEQSLAFYQRHFPDAYYLELLRTGRPDEEV
YLHMAVAIATEFELPVVATNEVVFLSAEDFDAHEIRVAIHDGYTLMDKRRPRRYSPQQYL
RSQEEMCELFADIPEALENTVEIAKRCNVTVRLGEYFLPNFPTGDMSTEDFLVMKSREGL
EDRLAFLFPDPEVRAAKRVEYDERLEIELKVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIEHVSE
MYGREAVSQIITFGSMAAKAVVRDVGRVLGHAYGFVDRISKLIPPDPGMTLAKAFEVEPK
LPELYEQDEEVKDLIDMARRLEGVVRNAGKHAGGVVIAPTKITDFAPLYCDDSGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALGMINPRLAKEGKPPIDIAAIPIDDKKSFALL
QRFETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIERKHGKEA
ISYPDEKWQHESLKPILEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKNPAEM
AKQRSGFEEGAVKNGVDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMTADMDNTDKIVTLVDECQRMGLTVIPPDVNTGRYRFSVNEDGHIVYGIGAVKG
VGEGPIDAILAARDSEGPFRDLFDFCNRVDIKKINKRVMEKLIFSGAMDRLGPHRAALMA
TLEEAMRAAEQHAKAQAVGQVDMFGVLTEEIDDVKKAFANVPHWPDKVWLEGERETLGLY
LTGHPINQYSSELRRYTSGRLCDLHPTSRDTITTAAGLVIAARSMVTKRGNKMGIFTLDD
RSGRLDVTLFSEALEKYEELMQKDRILVVSGQVSFDDFSGGLKMSARELLDINDARERFA
RAIRISLDEQRIDERFFPRLCEILEPARAGVCPVQVNYRRPGSRVRLTLGTEWRVTPTDQ
LIDDLRVLLGRERVELVFD
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacctcgtttcatccacctgcgggtccactccgacttctccatggtcgatggc
ctgcagaagataggccccatcgcctcggcggcggcggccaacgatatgccggcgctggcg
ctgaccgaccagatgaacatgtgcggcctggtgcgcttctatggctcggcccatggcaag
ggcatcaagcccatcgtcggggcggatttctgggtgcagagcgaggagctcggcgacgag
cagttccgcctcaccctgctcgccatggacaacgacggttaccagaacatcaccctgctc
atctcccgtggctatcagcgcggtcatgtgcagggtcgccccgtcatcgacaagagctgg
ctcgcggaacacgccaagggcgtgatagtgctgtccggcgggcgggagggggatctcggc
aagttcatgctcaagggcaaccggcagatggtggagcagagcctcgccttctaccagcgc
cacttccccgacgcctattacctcgagctgctgcgcaccggccgacccgatgaagaggtc
tacctgcacatggcggtggccatcgccaccgagttcgagctgccggtggtggccaccaac
gaggtggtgttcctctccgccgaggacttcgacgcccacgagatccgggtcgccatccac
gatggctacaccctgatggacaagcgtcgcccgcgccgctacagcccgcagcaatacctg
cgcagccaggaggagatgtgcgagctgttcgccgacatccccgaggcgctggagaacacg
gtggagatcgccaagcgctgcaacgtgacggttcgcctcggtgaatacttcctgccgaac
ttcccgaccggtgacatgagcaccgaagacttcctggtgatgaagtccagggaggggctg
gaggaccgactggccttcctgttcccggatcccgaggtgcgcgccgccaagcgcgtcgag
tacgacgagcggctggagatcgagctcaaggtgatcaaccagatgggcttccctggttac
ttcctcatcgtgatggagtttatccagtggtccaaggacaacggcatccccgtcggcccg
ggccggggctcgggggccgggtcgctggtggcctatgcgctcaagatcaccgatctggat
cccctcgaatttgatctgctgttcgaacgattcctgaacccggagcgggtctccatgccc
gacttcgacgtcgacttctgcatggaccggcgggacgaggtgatcgagcacgtctcggag
atgtatggccgggaggcggtctcccagatcatcaccttcggcagcatggcggccaaggcg
gtggtgcgggacgtgggccgggtgctgggccacgcctatggcttcgtggatcgcatctcc
aagctgatcccaccggatccgggcatgacgctggccaaggcgttcgaggtcgagcccaag
ctgcctgagctgtacgagcaggacgaggaggtcaaggatctcatcgacatggcgcgccgg
ctggaaggggtggtgcgcaacgccggcaaacacgcaggtggtgtggtgatagcccccacc
aagatcaccgacttcgcgccgctctattgcgatgactccggccatcacccggtcacccag
ttcgacaagaacgacgtggagtacgcgggcctggtgaagttcgacttcctggggctgcgc
accctgaccatcatcgactgggcgctcggcatgatcaacccgcgcctcgccaaggagggc
aagccgccgatcgacatcgccgccatccccatcgatgacaagaagtcgttcgcgctgctg
cagcgcttcgagaccacggcggtgttccagctggaatcccgcggcatgaaggatctcatc
aagcggctgcagcccgactgcttcgaagacatgatcgccctggtggcgctgttccgccct
ggtccgctgcagtccggcatggtggacaacttcatcgagcgcaagcacggtaaggaagcc
atctcctacccggacgagaagtggcagcacgagagcctcaaacccatactcgaacccacc
tacggcatcatcctctatcaggagcaggtgatgcagatagcccaggtgctggcgggctat
acgctgggtggggctgacatgctgcgccgggccatgggcaagaaaaaccctgccgagatg
gccaagcagcgttccggcttcgaggaaggggcggtcaagaacggggtcgacggcgagctg
gcgatcaagatcttcgatctggtggagaagtttgcgggctacggcttcaacaagtcgcac
tccgccgcctatgcgctggtttcctaccagacgctgtggctcaagacccacttcccggcc
gagttcatggcggcggtgatgaccgccgacatggacaacaccgacaagatagtgacgctg
gtggacgagtgccagcggatggggctcaccgtgataccgccggacgtgaacaccggtcgc
taccggttcagcgtcaatgaggacggccatatcgtctacggcataggcgcggtgaagggg
gtcggcgagggccccatcgacgccatcttggcggcgcgagacagtgagggtcccttccgc
gatctgttcgacttctgcaaccgggtcgacatcaagaagatcaacaagcgggtgatggag
aagctgatcttctccggcgccatggaccgactgggtccgcaccgggcggcgctgatggcc
acgctggaggaggcgatgcgcgccgccgagcagcacgccaaggcgcaggcggtgggccag
gtcgacatgttcggggtgctcaccgaggagatcgacgacgtcaagaaggcgttcgccaac
gtgccgcactggcccgacaaggtctggctggaaggggagcgggagacgctcggtctatat
ctgaccggccatcccatcaaccagtacagcagcgagctgcgtcgttatacgtcggggcgg
ttgtgcgatctgcaccccacctcccgcgacaccatcaccacggcggcggggctggtgatc
gccgcccgcagcatggtgaccaagcgtggcaacaagatggggatcttcaccctggacgac
agatccggccgtctggatgtgaccctgttcagtgaagcgctggaaaaatacgaagaattg
atgcaaaaagaccgtattttagtggtttctggacaggtcagctttgatgacttctccggt
ggccttaaaatgtcggcccgcgaattgctggatattaacgatgcgagggagcgtttcgcc
agggcgatccgcatttccctcgatgaacaacgcattgatgagcgctttttcccgcgtttg
tgcgagattttggagcccgcccgtgccggagtctgtccggttcaggtaaactatcgtcgc
cccggctcccgggtgcgattgacgctcggtaccgagtggcgggtgacgcccaccgatcaa
ctgatagatgacttgcgagtcctgcttggacgagagcgggttgaattggtttttgattag
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