Aeromonas encheleia: NCTC12917_04195
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Entry
NCTC12917_04195 CDS
T06531
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ael
Aeromonas encheleia
Pathway
ael03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ael00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12917_04195 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ael03019
]
NCTC12917_04195 (rhlB)
Enzymes [BR:
ael01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC12917_04195 (rhlB)
Messenger RNA biogenesis [BR:
ael03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC12917_04195 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
VEG98534
LinkDB
All DBs
Position
1:4475895..4477184
Genome browser
AA seq
429 aa
AA seq
DB search
MSKTHLTTEKFAQMGLEPEVLAGLESKGFHYCTPIQALSLPLLVEGHDLAGQAQTGTGKT
LAFLAATFNYLLTHPLTQPRLINQPRAIILAPTRELAVQIYNDAEGMSASTGLKLGLAYG
GEGYDKQLAVLEQGVDILIGTTGRIIDYFKSKVIDLGSIQVVVLDEADRMFDLGFIKDIR
FLFRRMPPATERLSMLFSATLSLRVQELAYEHMNHPEHVQIEPEQMTGVRIKEELFYPSN
EDKMLLLLSLMEEEWPEKAIVFANTKHVCEDVHAWLENDGHRVGLLTGDVPQKKRMKILE
EFTKGTLDVLVATDVAARGLHIPDVTHVFNYDLPDDAEDYVHRIGRTGRAGKSGHSISLA
CEDYAFNLPAIEEYIHHPIPVSKYDRESLLDDVTAPKRVFRNRQPVNRNMRDRQGGGNSN
NRRRPPRKN
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacaccttacgaccgaaaaattcgcccaaatgggcctcgaacccgaagtt
ctggctggtctggaatcaaagggatttcactattgcacgcccatccaggcactgtctctg
ccactgctggtagaaggccatgacctcgccggtcaggcccagacgggaaccggcaagacc
ctcgccttcctggcagcgaccttcaactatttgctgacccacccgttgacccagccgcgc
ctgatcaatcagccgcgcgccatcatactggcacctacccgtgagctggccgtccagatt
tacaacgacgctgaaggcatgtccgcctccaccggtctgaagctcggtctcgcctatggc
ggcgaaggctacgacaagcagctggccgtgctggaacagggtgtcgacatcctgatcggc
accacgggtcgcatcattgactacttcaagtccaaggtcatcgatcttggcagcatccag
gtcgtggtgctggacgaagcggatcgcatgttcgatctcggcttcatcaaggacatccgc
ttcctgttccgtcgcatgccgccggccaccgagcgcctgagcatgctgttttccgccacc
ctctccctgcgcgtgcaggagctggcctacgagcacatgaaccacccggaacacgtgcaa
atcgaaccggaacagatgacgggcgtacgcatcaaggaggagctgttctacccctccaac
gaagacaagatgctgctgctgctctccctgatggaagaggagtggccggagaaagccatc
gtcttcgccaacaccaagcatgtctgtgaagacgtgcatgcgtggctggagaacgacggc
caccgggtcggcctgctgaccggtgacgtgccgcagaagaagcggatgaagattctggaa
gagttcaccaagggaacgctggacgtcctggtcgccaccgacgtggccgcccgtggtctg
cacatcccggacgtgacccacgtcttcaactacgacctgcccgacgatgccgaagactat
gtacaccgtatcggtcgtaccggtcgtgccggcaagagcggtcactccatcagcctggcc
tgtgaagactatgccttcaacctgccggccatcgaggagtacatccatcaccccatcccg
gtcagcaagtatgatcgcgagtcgctgctggatgacgtgaccgccccgaaacgggtgttc
cgcaaccgccagccggtgaaccgcaacatgcgggatcgccagggtggtggcaacagcaac
aaccgccgtcgcccgccccgcaaaaactaa
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