Arcobacter ellisii: AELL_0093
Help
Entry
AELL_0093 CDS
T06558
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aell
Arcobacter ellisii
Pathway
aell03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aell00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AELL_0093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aell03019
]
AELL_0093
03009 Ribosome biogenesis [BR:
aell03009
]
AELL_0093
Enzymes [BR:
aell01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AELL_0093
Messenger RNA biogenesis [BR:
aell03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AELL_0093
Ribosome biogenesis [BR:
aell03009
]
Prokaryotic type
rRNA helicases
AELL_0093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Ribosomal_L12_N
Cas3-like_C_2
PIF
DeaD_dimer
Motif
Other DBs
NCBI-ProteinID:
AXX93800
UniProt:
A0A347U4M2
LinkDB
All DBs
Position
84209..85798
Genome browser
AA seq
529 aa
AA seq
DB search
MTFNEFNFKEQLQKAIDEAGFKEPSPIQEQAIPVILSGKDIVGQAHTGTGKTAAFGLPIL
NKLKGKSGVEAVVIVPTRELAMQVSDELYRFGRFLGINTATVYGGQAYARQIKLIENASI
IIATPGRFLDLLRGDKIDIKPDFVILDEADEMLDMGFLDDIKEIFTFLPENRQTLLFSAT
MPTAIKNLAKTILKEPEFITLTKSDVTNAKITQTFYVVDEKERDDALIRLYDYKNPTKSI
IFCRTKKEVDRLSTFMVSQGFMAKGLHGDMEQRQREEAIRAFKTSKLEILIATDVAARGL
DVNDVSHVFNYHLPFDSESYVHRIGRTGRAGKEGVAVSIVTPHEFRMLQKIEKNIGTKLE
GKTVPNISSVKMKKFADLKQQIIEQEVKDYALELVEELKEEFDISTIAFKLASMISASTY
VQGNNNIGKSESDIKRLIENSSRNDREDSGRNSRGGRGGRFGSRGGDRDRGSRSGDRNGD
RNSRGGDRDRAPRGDRAPRPSGDRKPSGDRAPRGDRPSRPSGDRSRKRD
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgacttttaacgaattcaattttaaagaacaattacaaaaagcaatcgacgaggcagga
tttaaagaaccaagtccaattcaagaacaagcaattccagttattttatcaggaaaagat
attgttggacaagctcacacaggtacaggaaaaacagcagcatttggacttccaatttta
aataaattaaagggaaaatcaggtgttgaagcagttgtaattgttccaactagagaactt
gcaatgcaagtttcagatgaattatatagatttggaagattcttaggaattaacactgca
actgtttatggtggacaagcttatgctagacaaatcaaattaattgaaaatgcaagtatt
attattgcaactcctggaagatttttagatcttttaagaggtgataaaattgatataaaa
ccagattttgttattcttgatgaagcagatgaaatgcttgatatgggatttttagatgat
attaaagagatttttactttcttaccagaaaatagacaaactttattattctctgcaact
atgccaacagcaattaaaaatcttgcaaaaacaattttaaaagaaccagaatttattaca
ttaacaaaaagtgatgtaacaaatgcaaaaattactcaaactttttatgttgtagatgaa
aaagagagagatgatgcattaattagactttatgattacaaaaatccaacaaaatcaatt
attttttgtagaactaaaaaagaagttgatagattatcaacatttatggtttctcaagga
tttatggcaaaaggtcttcatggtgatatggaacaaagacaaagagaagaagcaattaga
gcatttaaaacttctaaacttgaaatcttaattgcaacagacgttgcagcaagaggatta
gacgtaaatgatgtttcacatgtatttaactatcatttaccatttgattctgagtcatac
gtacatagaattggaagaacaggtagagctggtaaagaaggtgttgctgtttcaattgtt
actccacatgaatttagaatgttacaaaaaattgaaaaaaatatcggtacaaaattagaa
ggtaaaacagttccaaatatcagttctgtaaaaatgaaaaaatttgctgatttaaaacaa
caaataattgagcaagaagtaaaagattatgctttagagttagttgaagagttaaaagaa
gagtttgatatctctacaattgctttcaaattagcttcaatgatttctgcatcaacttat
gttcaagggaataataatatcggaaaatctgaaagtgatattaaaagacttattgaaaat
agttcaagaaatgatagagaagactctggaagaaattcaagaggtggaagaggtggacga
tttggttcaagaggtggagatagagatagaggttcaagaagcggtgatagaaacggtgac
agaaactcaagaggtggagatagagatagagcaccaagaggtgatagagctccaagacca
tcaggagatagaaaaccaagtggagatagagctccaagaggtgacagaccttcaagacca
tcaggtgatagaagtagaaaaagggattaa
DBGET
integrated database retrieval system
