Arcobacter ellisii: AELL_0443
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Entry
AELL_0443 CDS
T06558
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aell
Arcobacter ellisii
Pathway
aell03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aell00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AELL_0443 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aell03019
]
AELL_0443 (recQ)
03400 DNA repair and recombination proteins [BR:
aell03400
]
AELL_0443 (recQ)
Enzymes [BR:
aell01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AELL_0443 (recQ)
Messenger RNA biogenesis [BR:
aell03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AELL_0443 (recQ)
DNA repair and recombination proteins [BR:
aell03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AELL_0443 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
HTH_40
ResIII
Helicase_Sgs1
Tho2
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
AXX94135
UniProt:
A0A347U5K7
LinkDB
All DBs
Position
428444..430549
Genome browser
AA seq
701 aa
AA seq
DB search
MNKKYQILKDIFGHDKFRSFQEEVVDCILAKQDVLTILPTGGGKSLCYQLPTLLMNGTTV
VISPLIALMQDQIKALNDLNISAEMISSATSNDENSFTLQKLLTGELKFIYVAPERFTSN
EFVAVLQRININYFVIDEVHCVSAWGHEFRAEYRNLDRLKRFFPNTSICAFTATATKKVE
ADISQSLNLQNPRHFRAKTVRDNLDIKVEPRIANGKTQILNFLKTHKGLCGIIYTFTRKE
AESIAEFLSESGYSAKAYHAGLSNDKKNEVFNDFVYEKIDIVVATIAFGMGIDKSNIRFV
IHTSLPKTLENYYQEIGRAGRDGEMSYVYMLYSKSDEVKRKIQIEEAIDDGYKQTALDKL
EFMYRYCVSNNCRHKMIAGYFEDEIDSCKTLCDNCTKGEVKQVDVSVDAQKLLSAIYRSE
QRFGLNHIIDILRGSKNQKLLEFGHDKLSVYNLGVDKSKNEWIAIADKLIDIQALVLGEF
RVLKISNLGLEILKGKEKLFIDSDKLGIASKIQEEETELGFDELVYERFRNLRREIALES
EVPAYVIFGDKTLKEFANKLPTSKDEMLNINGVGLVKYEKYGESFLNLCKEIKEEFKEKL
EQKEPLKKLTKTYLETFELLNEGKSVEEISQIRDLGLTSILGHITVLFEHKKISKEKKEE
LLKPLEIPENIKIWIEEGLKLDSFKELRQHLYLYEYLKKEL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaataccaaatactaaaagatattttcggacacgataaatttagaagcttc
caagaagaggttgttgattgtattcttgctaaacaagatgttttgacaattttgccaacg
ggtggtgggaaatcactttgttatcagcttcctacacttcttatgaatggaactactgtt
gtaatttctccacttattgcacttatgcaagaccaaatcaaagcacttaatgatttgaat
attagtgcagagatgataagttctgctacttcaaatgatgaaaatagttttactcttcaa
aagcttttaactggggaattaaaatttatttatgttgcacctgaaaggttcacttcaaat
gagtttgttgccgttttacaacgaataaatataaactattttgtaattgatgaagtgcac
tgtgtttcggcttggggacatgagttcagagctgaatatagaaatcttgatagattaaaa
agattttttccaaatacttcaatttgtgcatttacagcaacggctacaaaaaaagtcgaa
gctgatatttctcaaagtctaaacttacaaaatccaagacatttcagagcaaaaactgtg
cgagataatcttgatataaaagtagaaccaagaattgcaaatggaaaaactcaaatttta
aacttcctaaaaacacataaaggtttatgtggaattatctatacttttacaagaaaagaa
gcagaatcaatagcagagtttttgagtgaaagtggttacagtgcaaaagcttatcatgcg
ggacttagtaatgataaaaaaaatgaagtttttaatgattttgtatatgagaaaatagat
attgtggtagcaactatcgcttttggaatgggaattgataaatcaaatattcggtttgta
attcacacatctttgcctaaaacccttgaaaactattatcaagagataggtcgagcaggg
cgtgatggcgaaatgtcttatgtttatatgctttattcaaaatctgatgaggtaaaaaga
aaaatccaaatcgaagaagctattgatgatggctacaaacaaactgcccttgataaattg
gagtttatgtatagatattgtgtgagtaataattgccgtcataaaatgattgcaggatat
tttgaagatgaaattgactcttgtaaaactttgtgtgataactgtacaaaaggggaagta
aagcaggttgatgtgagtgtggacgctcaaaaacttctaagtgcaatttatagaagtgaa
caaagatttgggttaaatcatattattgatatattaagaggttcaaaaaaccaaaaactt
ttagagtttgggcatgataaattgagtgtttataatctaggagttgataaaagtaaaaat
gaatggattgcaatcgctgataaactaatcgatatacaagctttagttttaggggagttt
agagttttaaaaatttcaaatttaggtttagagattttaaaaggtaaagagaaacttttt
attgatagtgataaattaggaattgcctcaaaaattcaagaggaagaaactgaactcggt
tttgatgagttagtttatgaaagatttagaaatctaagaagagaaatagctcttgaaagt
gaagttccagcttatgtgatttttggggataaaactttaaaagagtttgcaaataaactg
ccaacttcaaaagatgaaatgttaaatataaatggtgttggtcttgtaaaatatgaaaaa
tatggagaaagttttttaaatttatgtaaagagataaaagaggaatttaaagaaaaactt
gaacaaaaagagcctctaaaaaaactcacaaaaacatatttagaaacttttgaacttttg
aatgagggaaaaagtgtagaagagatatctcaaattagagatttaggattaacttcaatt
cttggtcatattacagttttatttgaacataaaaaaatctcaaaagagaaaaaagaagaa
cttttaaaacctttagaaattccagaaaatataaaaatttggatagaagagggcttaaaa
cttgatagttttaaagagttaagacaacatctatatttgtatgaatatttaaaaaaagag
ttgtaa
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