Arcobacter ellisii: AELL_1440
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Entry
AELL_1440 CDS
T06558
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aell
Arcobacter ellisii
Pathway
aell03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aell00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AELL_1440 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aell03019
]
AELL_1440 (pnp)
03016 Transfer RNA biogenesis [BR:
aell03016
]
AELL_1440 (pnp)
Enzymes [BR:
aell01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AELL_1440 (pnp)
Messenger RNA biogenesis [BR:
aell03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AELL_1440 (pnp)
Transfer RNA biogenesis [BR:
aell03016
]
Prokaryotic type
tRNA degradation factors
AELL_1440 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
DUF2200
MIC19_MIC25
KH_2
Motif
Other DBs
NCBI-ProteinID:
AXX95102
UniProt:
A0A347U8C4
LinkDB
All DBs
Position
1400085..1402259
Genome browser
AA seq
724 aa
AA seq
DB search
MATVCEFELNGKQEIFEFEKVAKQANGSVLAKIGNAVVLATVVSEFDNPVSEDFTPLTVQ
YIEKTYAAAKLPGGFIKREGKPSDFETLTSRVIDRSLRPLFPKGYVYPTTITVMVLSADK
DVDLQTLALNAANAALYTSNLPIKKSVCGVRVAKIENNLVINPTPAELENSVLDLYVAGS
KDELLMIEMKTISSSELVEVDIEAFTKIHNSNEMNEDTLVEAIAFAQNALKEANLSYEKA
FEEVSKEKVQVELIKFTIEESVINYVRDNFSNEIREAIKKLAKSERATQLKDVAKMISKN
EYCITNELEFNTIYEAVSIVKREIVRAMIVNDKVRADGRGLKDVRPITIETNILPSTHSS
CLFTRGETQALVIGTIAGPKDGQMYEVLTDKSTSMERFMVHYNFPGFSVGEAKPMFGVGR
RELGHGNLAKKALEATIDDDYNETVRLVSEILESNGSSSMATVCGGSLALKAAGVPISDL
VAGVAMGMVVEDGKYSILTDIMGLEDHDGDMDFKVAGTNKGITALQMDIKLGGIELNVLK
EALLQAKEGREHILGLMNEAANEIVPSEALPLVEQFAIDPSKIMVIIGKAGATIKEIIEK
FTVSIDLDRDSGTVKVSGENKQNVLDACEHIKTISNNAPSRKETPKNVDFEKLYQVDEVV
TGKVERLVDFGAFILLPKGGEGLLHISKISKERVNNISDVLSVGQDIEVKVLKVKKDRIE
LSSN
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagtgtgtgaatttgaattaaatggaaaacaagagatttttgaatttgagaaa
gtagctaaacaagcaaatggttcagttttagcaaaaatagggaatgcagtagtattagca
actgttgtaagtgaattcgataatcctgttagtgaagattttactcctttaacagttcaa
tatatagaaaaaacttatgcagctgcaaaattacctggtggttttataaaaagagaagga
aaaccaagcgattttgaaactttaacatcaagagtaattgatagaagtttaagaccactt
ttcccaaaaggttatgtttatcctacaacaattacagttatggttttaagtgcagataaa
gatgttgatttacaaacattagcgttaaatgctgcaaatgctgctttatacacatctaat
ttaccaattaaaaaatctgtttgtggagtaagagttgctaaaatagaaaataatttagtt
attaatccaactccagctgagttagaaaattctgttttagatttatatgtagctggatct
aaagatgaattattaatgattgaaatgaaaactatctcttctagtgaattagttgaagtt
gatattgaagcatttactaaaatccataattcaaatgaaatgaatgaagatactttagtt
gaagcaattgcctttgcacaaaatgctttaaaagaggctaacttaagttatgaaaaagct
tttgaagaagtttcaaaagaaaaagttcaagtagaattaattaaatttactattgaagag
tctgtaataaattatgttagagataatttttcaaatgagataagagaagctattaaaaaa
cttgcaaaaagtgaaagagcaactcaattaaaagatgttgctaaaatgatttctaaaaat
gaatattgtattacaaatgagttagaatttaatacaatttatgaagcagtttcaattgta
aaaagagaaattgtaagagcaatgattgtaaatgacaaagtaagagctgatggaagagga
ttaaaagatgttagaccaattactattgaaacaaatattttaccatcaactcactcttct
tgtctattcacaagaggtgaaacacaagcattagttataggtacaattgcaggacctaaa
gatggacaaatgtatgaagtattaactgataaatcaacttcaatggaaagatttatggtt
cattataacttcccaggtttttcagttggtgaagctaaacctatgtttggtgttggaaga
cgagaattaggacatggtaatttagctaaaaaagcacttgaagctacaattgatgatgat
tacaatgaaactgtaagattagtttctgaaattttagaatcaaatggttcttcttctatg
gctacagtttgtggaggttctttagcattaaaagcagctggagttccaatttctgattta
gttgcaggtgttgctatgggaatggttgtagaagatggtaaatattcaattttaacagat
attatgggacttgaagaccatgatggggatatggactttaaagttgctggaactaataaa
ggaattactgctttacaaatggatataaaacttggtggaattgaattaaatgttttaaaa
gaagccttattacaagcaaaagagggtagagagcatattttaggacttatgaatgaagct
gcaaatgaaatagttccaagtgaagctttacctttagttgaacaatttgcaattgaccca
agtaaaataatggttatcattggaaaagctggagcaacaatcaaagaaattattgaaaaa
ttcactgtttcaatcgatttagatagagatagtggaacagtaaaagttagtggtgaaaat
aaacaaaatgttttagatgcttgtgaacatattaaaactatttcaaataatgctccttca
agaaaagagacaccaaaaaatgttgattttgaaaaattatatcaagttgatgaagttgtt
acaggaaaagtagaaagattagtggattttggtgcatttattcttttaccaaaaggtgga
gaaggtcttttacatatttcaaaaatttctaaagaaagagtaaataatatttcagatgtt
ttatctgttggacaagatatcgaagtaaaagttttaaaagttaaaaaagatagaatagaa
ttatcttcaaattaa
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