Aeromonas sp. CU5: CK911_02075
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Entry
CK911_02075 CDS
T05327
Name
(GenBank) DNA topoisomerase I subunit omega
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aem
Aeromonas sp. CU5
Brite
KEGG Orthology (KO) [BR:
aem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aem03032
]
CK911_02075
03400 DNA repair and recombination proteins [BR:
aem03400
]
CK911_02075
Enzymes [BR:
aem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CK911_02075
DNA replication proteins [BR:
aem03032
]
Prokaryotic type
DNA Topoisomerases
CK911_02075
DNA repair and recombination proteins [BR:
aem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CK911_02075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
ATL91719
UniProt:
A0A291TF06
LinkDB
All DBs
Position
457825..460446
Genome browser
AA seq
873 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDYVVKSSVGHVRDLPTSGSASTEPKKPVIRGIKLSET
EKAAKDRKALFARMGINPTAGWQANYQILPGKEKVVSELQALAEKADIIYLATDLDREGE
AIAWHLREIIGGDDSRYKRVVFNEITKSAIQEAFAQPSELNIHRVNAQQARRFLDRVVGY
MVSPLLWKKLARGLSAGRVQSVAVRLIVDKEREIKAFVPVEFWDLNADLLTGEQSALRME
VVSRNGADFKPVTQAETFAAVAALEGVDYKVVNREDKPTGSKPSAPFITSTLQQAASTRL
SFGVKKTMMMAQRLYEAGYITYMRTDSTNLSKEAVEALREYIGEQYGAAYLPAEPLLYGA
KAGAQEAHEAIRPSSVLVTAEMLEGMEPDAMRLYDLIWRQFVACQMTPAQYDSSTLTVKA
GEFELKARGRILRFAGWTKALPPMGRKGDDSQLPAVTVGEVLKLVKLDPRQHFTKPPARF
TEAALVRELEKRGIGRPSTYASIISTIVDRGYVRVESRRFFAEKMGEIVTDRLVENFVEL
MNYEFTAKMEDKLDGVAEGSLEWKQVLDSFYAEFTQELEKADKSSEEGGMRANQMVMTDI
DCPDCSRKMGIRTATTGVFLGCSGYALPPKERCKKTINLVSADEFVSTTDGDEAETEALR
AKHRCEVCGTAMDAYIIDDSRKLHVCGRNPDCDGYEIEKGQFKLKGYEGPSIECDRCGSE
MQLKNGRFGKYMGCTNETCKNTRKILKNGDIAPPKEDPVPLPELKCTQSDAYFVLRDGAA
GLFLAASNFPKSRETRAPLVEELQRFKDRISAKHKYLAGAPLTDPDGNPAIVRFSRKTKE
QYVMSEVNGKATGWTAHYDNGTWQQSLPKPKKA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcactggtcatagtggagtctccggccaaggccaagacgatcaacaaatat
ctgggcaaggactacgtggtgaaatccagcgtcggtcatgttcgcgatctgcccaccagt
ggcagcgccagcaccgagcccaagaaacctgtcattcgcggcatcaagttgagcgaaacc
gagaaggctgccaaggatcgcaaggctctgttcgcccggatgggtatcaatccgaccgct
ggctggcaggctaactaccagattttgcccggcaaggagaaggtggtcagcgagttgcaa
gcgttggctgaaaaagctgacatcatctatctcgcaaccgacttggatagagaaggagag
gcgatcgcctggcacctgcgcgagatcatcggaggtgacgacagccgctataagcgggtg
gtgttcaacgagatcaccaagagcgccatccaggaggcgtttgctcagccatccgagctg
aacatccaccgtgtcaatgcccagcaggcccgtcgtttcctcgatcgggtggtgggttac
atggtctctccgctgttgtggaaaaagctggcccgcggtctgtctgcgggtcgggtgcag
tccgtagcggtgcgcctcatcgttgataaagagcgtgaaatcaaggcgttcgtgccggtc
gagttttgggatctcaatgccgacctgctgaccggcgagcagtctgccctgcgtatggaa
gtggttagccgcaatggtgccgacttcaagccggtgacccaggccgaaaccttcgccgcg
gtcgcagccctggaaggggtcgattacaaggtggtgaaccgggaagacaagccgaccggt
tccaagccgtccgcgccgttcattacctccaccttgcagcaggctgcctctacccgcctg
agcttcggggtgaagaagaccatgatgatggcccagcgtctctatgaggcgggttacatc
acctacatgcgtactgactccaccaacctcagcaaagaggcggtcgaagcgctgcgtgaa
tatatcggcgagcagtatggcgcagcctatctgcccgctgaaccgctgctctatggtgcc
aaggcgggagcccaggaagcgcacgaggcgatccgtccctccagcgtgctggtcacggct
gagatgctcgaagggatggaaccggatgccatgcgtctgtacgatctcatctggcgtcag
tttgtcgcctgtcagatgaccccggctcagtacgactcctctaccctgaccgtcaaggcc
ggtgagttcgagctcaaggcccgtggccgtatcttgcgcttcgctggttggaccaaggcg
ctgccgccgatggggcgcaaaggcgacgacagccagctgcctgcggtgaccgtgggcgag
gtgttgaaactggtcaagctggatccgcgccagcacttcaccaagccgcctgcacgcttt
accgaagcggcgctggttcgcgagctggaaaaacgtggcatcggccgtccttccacttac
gcttccatcatctccaccatcgtcgatcgtggttatgtgcgggtcgagagccgccgcttc
ttcgccgagaagatgggtgagattgtcaccgatcgtctggtggaaaacttcgtcgagctg
atgaactacgagttcaccgccaagatggaagacaagctcgatggcgttgctgaagggagc
ctggagtggaagcaggtgctggacagcttctacgccgagtttactcaagagctggaaaaa
gcggacaagtcatcagaagagggcggcatgcgtgccaaccagatggtgatgaccgatata
gattgcccggattgcagccgcaagatggggatccgtaccgccactaccggcgtgttcctc
ggctgttccggttatgccctgccgccgaaagagcgttgcaagaagaccatcaacctggtc
tccgccgacgagtttgtctccaccaccgacggggatgaggcggaaaccgaagcgctgcgc
gccaagcaccgctgcgaagtctgcggcaccgcgatggatgcctacatcatcgatgacagc
cgcaagctgcacgtctgtggtcgcaaccctgactgcgatggctacgaaatcgaaaaaggc
cagttcaagctcaagggctacgaagggccgagcatcgagtgcgaccgttgcggtagcgag
atgcagctcaagaacggccgtttcggcaagtacatgggttgcaccaacgaaacctgcaag
aacacccgcaagatcctgaaaaacggtgacatcgcgccgccgaaggaggatccggtgccg
ctgcctgagctcaagtgcacccagtccgatgcttacttcgtgctgcgtgacggtgcggcc
ggtctgttcctggctgccagcaacttccccaaatcccgcgagactcgcgcgccgctggtg
gaagagctgcaacgcttcaaggatcgcatctctgccaagcacaagtatctggccggtgcc
ccgctcaccgatccggatggcaaccccgccatcgtgcgcttcagtcgcaagaccaaggag
cagtacgtgatgagcgaggtcaacggcaaggcgaccggttggaccgcgcactacgacaac
ggcacctggcaacagagcttgcccaagccgaagaaagcgtga
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