Aeromonas sp. CU5: CK911_03440
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Entry
CK911_03440 CDS
T05327
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aem
Aeromonas sp. CU5
Pathway
aem03030
DNA replication
aem03430
Mismatch repair
aem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CK911_03440
03430 Mismatch repair
CK911_03440
03440 Homologous recombination
CK911_03440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aem03032
]
CK911_03440
03400 DNA repair and recombination proteins [BR:
aem03400
]
CK911_03440
Enzymes [BR:
aem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CK911_03440
DNA replication proteins [BR:
aem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CK911_03440
DNA repair and recombination proteins [BR:
aem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CK911_03440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ATL91952
LinkDB
All DBs
Position
743440..744174
Genome browser
AA seq
244 aa
AA seq
DB search
MNTPQLNRQIILDTETTGMNTSGGPIYMGHRIIEIGCVEVINRKLTGNHYHVYIKPDRLV
DPEAIQVHGITDAYLADKPPFRQIADDFIEFIRGAELIAHNAPFDVSFMDYEFSKLGLDF
KTADICSITDTLAMARDIFPGKRNNLDVLCDRYGIDNSHRTLHGALLDAEILADVYLLMT
GGQTKLNLASENSENENNQDTSIRRLESNRPALNIVRATAEDLALHEARLDLVQKKGGSC
LWRE
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaccccaactgaatcgccagatcatcctggatactgaaaccacgggtatgaac
accagtggcggccctatctatatgggtcaccgcatcatcgaaatcggctgtgtggaggtg
atcaaccgcaagctgaccggtaatcactaccacgtctatatcaagccggatcggctggtt
gacccggaagccatccaggtgcacggcattacggatgcgtatctggctgacaagcctccc
ttcagacagatagctgatgacttcatcgagtttattcgtggcgcagagcttatcgctcac
aacgcgccgtttgacgtcagctttatggattatgagttcagcaagctcggactcgacttc
aagacggcagatatctgcagcatcacagataccttggcaatggcccgggatatctttccc
ggcaaacgtaacaacctggatgtgctgtgtgatcgctacggcatagacaactctcaccgg
accttgcacggggctttgctcgatgcggagatcctggcggatgtctatctgctgatgacc
ggtggccagaccaagctgaatctggcgagcgaaaacagcgaaaatgaaaacaatcaggac
accagtattcggcggctggagagcaaccgtcccgcgctcaatattgtgcgcgccactgcc
gaggatctggcactgcacgaggccagactcgatttggtgcagaaaaaaggaggtagttgc
ctgtggcgagagtga
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