Aeromonas sp. CU5: CK911_05970
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Entry
CK911_05970 CDS
T05327
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aem
Aeromonas sp. CU5
Pathway
aem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CK911_05970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aem03019
]
CK911_05970
03400 DNA repair and recombination proteins [BR:
aem03400
]
CK911_05970
Enzymes [BR:
aem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CK911_05970
Messenger RNA biogenesis [BR:
aem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CK911_05970
DNA repair and recombination proteins [BR:
aem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CK911_05970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
AAA_22
TniB
Motif
Other DBs
NCBI-ProteinID:
ATL92410
UniProt:
A0A291TH97
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All DBs
Position
complement(1333969..1335882)
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AA seq
637 aa
AA seq
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MIPSLLNQYFGFSELRPGQEQVISRVLAGQSAAAIFPTGSGKSLCYQLPALALPHLTLVI
SPLIALMHDQLAFLKSKGISAATLDSSQSPEESRRVMQHALDGQLKILMISVERLKNERF
RRFIEQVPLSLLVVDEAHCISEWGHNFRPDYLKLPSYRHDLKIPQVLLLTATATPAVIQD
MQAKFGIEPEGVVVTGFYRANLDLAVMPLAPDARDGWLAQTLMQDPAAPTIVYVTLQHTA
EACAEQLIRQGINARAYHAGLDSALRSQIQHDFMAGKVACIVATIAFGMGIDKADIRRVI
HYDLPKSIENYSQEIGRAGRDGQPSRCIVLANQSQLPVLENFVYGDTPDLSAILQLLAII
GQSGAEWEFTLLRLANETNIRQLPLKTLLVYLEMAGIITPAYSYYADYRFKFVLDKGDIL
SRFNPDRRQFLEQLFACAPQARSWCTMDFDALWQGYQGERQRAVAALDYLQQQGLIELES
KQMTEVYRITRQGWDNEQEATALHALFLQKEQSELARLQAMLDFFTSRECLSHRLARYFA
DEAAPVHCGHCSVCRGEVAYLPPLPQLAMPNEAGIRAWCDPLIAKTGSVDGRVLARFLCG
IATPLTSRVKAKSLAGSGQLAAHPFARVLAAVQQAYP
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgatcccatccctgctcaaccaatattttggtttctccgaactcaggccaggtcaggaa
caggtcatcagccgggtgctggctggccagagtgccgccgccatctttcccaccggctcc
ggcaagtccctctgttaccagctgcctgcccttgccctgccccacctgaccctggttatt
tcgccactgattgcgctgatgcatgatcagctcgccttccttaaaagcaaggggatcagc
gccgcgaccctcgactcaagccagagcccggaagagagtcgcagggtgatgcaacacgcg
ctggatggtcagctcaagatcctgatgatctcggtggaacggctcaaaaacgagcgcttt
cgccgctttatcgagcaagttcccctgtcactgctggtcgtcgacgaggcccactgtatc
tctgagtggggccacaactttcgtcccgactacctcaagctgccaagctatcgccatgac
ctgaagatcccgcaggtgttactactgaccgccaccgccaccccggcggttattcaggat
atgcaggccaaattcggcatcgagccggagggagtggtggtcaccggtttctatcgcgct
aaccttgatctggcggtcatgccactggcgcctgacgcgcgggatggctggctcgcgcaa
acgctgatgcaagatccggcggcccccaccattgtctatgtcaccttgcagcacaccgcc
gaagcctgcgccgagcaactcattaggcaagggatcaatgcccgcgcctaccatgccgga
ctcgactcggcgctgcgcagtcagatccagcacgacttcatggcaggcaaggtggcttgc
atcgtcgccaccatcgcctttggcatggggatcgacaaagcggatatccggcgagtcatt
cactacgatctgcccaaatccatcgagaactacagccaggagattggccgtgccgggcgg
gatggccagccatcacgctgcatcgtgctggccaaccagagccagctgccggtactggag
aacttcgtctacggcgatacgccggacttgagtgccatccttcagctgcttgccatcatc
ggccagagcggggccgaatgggaattcactctgctgcgcctcgccaatgagaccaatatt
cgccaactgccactgaaaaccctgctggtctatctggagatggcgggcatcatcaccccg
gcctacagctactacgccgactatcgcttcaagttcgtgctggataaaggcgatatattg
agtcgtttcaatccggatcgacgccagtttctggagcagctgttcgcctgcgccccacaa
gcacgcagctggtgcaccatggactttgacgccctctggcagggctatcagggggagcgg
cagcgggccgttgcggcgctggactacctgcaacagcagggcctaatcgagcttgaaagc
aagcagatgaccgaggtataccgcataacccgtcaagggtgggacaacgagcaggaagca
accgccctgcacgccctgttcttgcaaaaagagcagagcgagctggccagactgcaagcc
atgctcgactttttcacctctcgggagtgcctgagccatcgcctcgcccgctatttcgcc
gatgaagcggcgccggttcactgtggccactgttcggtctgtcgcggcgaggtagcgtat
ctgcctcccttgccccaactggccatgccaaacgaggctgggatccgcgcctggtgcgat
ccgctcattgccaagaccggctcggtggatggcagggtgctggcccgtttcctgtgtggt
atcgctacaccgctgaccagccgggtcaaggccaaatcactggcaggatctggtcagttg
gccgcacacccgtttgcccgcgtcctggcggcagtgcaacaagcctacccttga
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