Aeromonas sp. CU5: CK911_06525
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Entry
CK911_06525 CDS
T05327
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aem
Aeromonas sp. CU5
Brite
KEGG Orthology (KO) [BR:
aem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aem03016
]
CK911_06525 (rnd)
Enzymes [BR:
aem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CK911_06525 (rnd)
Transfer RNA biogenesis [BR:
aem03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CK911_06525 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
ATL92501
UniProt:
A0A291THR5
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All DBs
Position
1467406..1468518
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AA seq
370 aa
AA seq
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MHYQLITQQAELEHYLASLADVPLAIDTEFVRTRTYYPQLGLFQIYDGEHLALLDPLTLD
LSPLWQRLGRAGQIAILHASGEDLELIQHQAGHLPNQMHDTQLATAFLGYGVSVGFGALV
NEFLGVELEKDQARTDWLARPLTERQLEYAAADVFYLMPLYEKVMAKLRESGKFAWFEQE
CQNHSARKTQGSDPRQAYLEIVNAWQLGRRELAILRELAAWRQQEAVRRDLALNFVVKEL
HLFKVAERRPTSMRDLNELGLAPIEIKIHGKRMLDIVARAQQSDPDSWPEPIRRLVDFPQ
YKAELKRIKAMVEEKAKASNIPPELIASKKIIHQYFTWSWRMNDEERARSDKPMLLQGWR
YELVGHLLAQ
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcactatcaacttatcactcagcaagccgaacttgagcactatctcgcttctctggcc
gacgttcccctggctatcgatactgaattcgttcgcacccgcacctactatccccagctt
ggcctgttccagatctatgacggcgagcatctggcgctgctggatccgctgacgctggat
ctctcccccctctggcagcgactgggcagggcagggcagatcgccatcctgcacgcctca
ggcgaagatctggagcttattcaacatcaggcgggccacctgcccaaccagatgcacgac
acccagctggctaccgccttcctcggttacggcgtctcggtcggctttggcgcgctggtg
aacgaattcctcggggtcgagctggaaaaagatcaggcgcgcaccgactggctggcccgt
ccgctcaccgagcgtcagctcgaatacgcagcggcggatgtgttctacctgatgccgctc
tacgagaaagtgatggccaaactgcgggaaagcggcaagtttgcctggttcgagcaggag
tgccaaaaccactccgcccgcaagacccagggcagcgatccccgtcaggcttatcttgaa
atcgtcaacgcctggcagctgggtcgccgtgagctcgccatcctgcgcgagctggccgcc
tggcgtcagcaagaggcggtacgccgcgatctggccctcaacttcgtggtcaaagagctg
cacctgttcaaggtagcggagcgtcgtccgacctccatgcgcgatctcaacgaactggga
ctggcccccatcgagatcaagatccacggcaagcggatgctcgatatcgtcgcccgcgcc
cagcagagcgatcctgacagctggcccgagccgattcgtcggctggtggacttcccccag
tacaaggccgagctcaagcgcatcaaggccatggtggaagagaaggccaaggccagcaac
attccgcccgagctgattgccagcaagaagatcattcaccagtacttcacctggagctgg
cggatgaacgacgaagagcgggcccgcagcgacaagccgatgctgctgcaagggtggcgt
tatgagctggtaggtcacctgctggcacaataa
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