Aeromonas sp. CU5: CK911_11095
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Entry
CK911_11095 CDS
T05327
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
aem
Aeromonas sp. CU5
Brite
KEGG Orthology (KO) [BR:
aem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aem03400
]
CK911_11095
DNA repair and recombination proteins [BR:
aem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CK911_11095
Archaeal homologous recombinant proteins
CK911_11095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
ABC_ATPase
ABC_tran
AAA_21
MMR_HSR1
MeaB
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATL93299
UniProt:
A0A291TJG5
LinkDB
All DBs
Position
2539348..2543100
Genome browser
AA seq
1250 aa
AA seq
DB search
MKILSLSGENLASLTGAFTIDFTKGALGAAGLFAITGNTGAGKSTLLDAICLALYDEMPR
FIANRKNVAEVGRMDDEEKLKANDVRGILSRGHASGFAEVQFRGCDGRIWLARWAVRRAR
NRSEGRFQAQERTLTDIESGQVFSGSKRELQDRIDELVGLSWEQFRRAVILPQGEFAAFL
KSDANERSALLERMTGTELYSAISIQTYERAREEQQKLATIAQRLGDVALMDEATREQWV
SQQISLSTTLKHEQQQQQLMQDLRDLNSRIAAQLQGCAEGQAALDATLQAHGAAAPERDE
FARAEQAQVARADHDELARLTLEVQQQEKVIAELGPELAKLEEQTRQSALTEQQLLAEKI
AAEREWGALQPELKRAQELDTRIREKVQQLQKIQQEGAQEREVQLTLEQGWREQSKQVEL
LKQQHQQWGLWLEEHKGLAPVARQWQPLLTAVQDWAEDADKLQQLLTLRDHQLHTLQQLQ
RQLEQGQQKRDYWQQEQARLQQQQNELQEQQWESRLAKAQEQWQQQTEQLGQLRQLLELA
DYGRNHGEQHGRLQQEIAQLEQALSKLATLSEELAPARERLALQRDEARHALEQSRAIAS
FEQYRHILSDDEPCPLCGAKEHPYSQSQPQVAGILGQLAERVRSLDLEWERLNHQYIQCE
SERQELARQLAVRQQHLPELEARAEQLTQRWQQLGGDTLLGHPLPLRQSPIEWNELMSTL
LGRGQALEQGLAHSQQLLRQAQLGQQQLQGVRQQLSQLAAQHQQFDQQWQEADRQRIALE
GEVKGMGEQEATLRQRLEQGAHRLDEQMGGQPWRQWLGSQQWHEWQRACEAWLHGQSEWE
RLASEIASLTPALSAQEARLQNQRELLHKLERDYKEHEQQRQGLLTSRSGCLGGEEIPLV
ESRWQQRLQQLASELELMQSGARVVRERQTELKTRLTHVEQEKQTSSRRKREALGRWAAH
ASTLGIAEYDLRRLLAITPDELKARRTALQGLEDALGEARTRLAERQRALALEESKRDRY
REHHPELATLPDAELSEQLAALDARCRALEEQLFECKSKLAQAEAAALKAGGLQQELAAQ
QAVADHWQQLCDLIGQANGAKFRTFAQSLTLERLLLEANAQLAELSPRYRLERVPGTDLA
LQVVDLDMGDEVRSVDSLSGGESFLVSLALALALSSLSSRQTQVESLFIDEGFGTLDPDS
LDLALSSLDSLQAAGRQIGVISHVQTLVERIGVQIRVEALGGGESRVRVP
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttgtctctgtctggtgagaatctggccagtctgaccggcgccttcaccatc
gactttaccaaaggggcgctcggcgccgcgggcctgtttgccatcaccggcaacaccggc
gcgggcaaaagcactttgctcgacgccatttgtctcgccctctacgacgagatgccgcgc
tttatcgccaatcgcaagaacgtggccgaagtgggccgcatggatgatgaagagaagctc
aaggccaacgacgtgcgcggcattctcagtcgcggccacgccagcggctttgccgaggtg
cagtttcgtggctgcgatggccgcatctggctagcccgctgggcggtgcgccgggcccgc
aaccgctcggaggggcgctttcaggcgcaggagcgcaccctgaccgatatcgagtcgggg
caggtcttctccggcagcaagcgggagctgcaggatcgcatcgacgagctggtggggctc
tcctgggagcagttccgccgcgcggtgatcctgccgcagggggagtttgccgccttcctc
aaatcggacgccaacgagcgctccgccctgctcgaacggatgaccggcaccgagctctac
tccgccatctccatccagacctatgaacgggcgcgggaagagcagcagaagctggcgacc
attgcccagcgcctcggcgacgtggcgctgatggacgaggccacccgcgaacagtgggtg
agccagcagataagcctctccaccaccctcaaacatgaacagcagcaacaacagctgatg
caggatctgcgcgacctcaacagccgcattgccgcccagttgcagggctgcgccgaggga
caggcggcgctcgatgccaccctgcaagcccacggcgccgccgcccccgagcgcgacgag
tttgcccgcgccgaacaggctcaggtggcccgcgccgatcacgacgaactggcccgcctc
actctggaagtgcagcagcaggagaaggtgatcgccgagctggggccggagctggccaag
ctcgaggagcagacccggcagagtgccctcaccgagcagcagctgctggcggagaagatc
gccgccgagcgggagtggggcgccctgcaacccgaactcaaacgggcacaggagctcgat
acccgcatccgggaaaaagtgcagcagttgcagaagatccagcaggagggggcgcaggag
cgggaagtccagctcaccctcgagcagggctggcgcgagcagagcaaacaggtagaactg
ctcaagcagcaacaccagcaatgggggctctggctcgaagagcacaaggggctggccccg
gtggcccgccagtggcagcccctgctcaccgccgtgcaggattgggccgaggatgccgac
aagctgcaacagctgctcaccctgcgggatcaccagctgcacaccctgcagcagttgcaa
cgccagctggaacagggccagcagaagcgcgactactggcaacaggagcaggcgcggcta
caacagcaacaaaacgagctgcaggagcagcagtgggagagccgtctcgccaaggcgcag
gagcagtggcagcagcagaccgaacagctgggccagctgcgccaactgctggagctggcc
gattatggccgcaaccacggcgagcagcatggccgcttgcagcaggagattgcccagctg
gagcaggcgctcagcaaactcgccaccctcagcgaagagctggcgccagcccgcgagcgg
ctcgccctgcagcgggatgaagcgcgccacgcgctggagcagtcccgcgccatcgccagc
ttcgagcagtatcgtcacattctgagcgatgacgaaccttgcccgctgtgtggcgccaag
gagcacccctacagccagagccagccgcaggtggcggggatcctgggtcagttggctgaa
cgggtccgcagtctggatctcgaatgggaacggctcaaccatcaatacattcagtgcgag
agcgagcgtcaagagctggcccgtcagctggcggtgcgccagcagcacctaccggagctg
gaggcgcgcgccgagcagctgacccagcgctggcaacaactggggggcgataccctgctc
ggccatccgctgccactgcgccaaagccccattgagtggaacgagctgatgagcaccctg
ctcggccgtggccaggcgctggagcaggggctggcccacagccagcagctactgcgtcag
gcccagcttggtcaacaacagctgcaaggggtgcgtcagcaacttagccaactggctgcc
cagcaccagcagtttgaccagcagtggcaggaggccgaccgccagcgcatcgcgctggaa
ggggaagtgaaggggatgggcgagcaggaggcgaccctgcgccagcgccttgagcaaggc
gctcaccgcctcgacgagcagatgggtggccaaccgtggcgccagtggctcggcagccag
cagtggcacgagtggcagcgggcctgcgaagcctggctgcacggccagagcgagtgggag
cggctggccagcgagatcgccagcctcaccccagccctgagcgcacaggaggcgcgcctg
cagaaccagcgcgagctgctgcacaaactcgagcgggattacaaggagcacgagcagcag
cggcaggggctgctcaccagccgcagcggttgtctcggcggtgaggagatcccgctggtc
gagagccgttggcaacagcggctgcaacaactcgccagcgaactggagctgatgcagagc
ggcgcccgcgttgtgcgggagcggcagaccgagctcaagacccgcctcacccatgtggag
caggaaaaacagaccagcagccgccgcaagcgggaggcgttggggcgctgggctgcccac
gccagcacccttggcatcgccgaatacgacctgcgccgcctgctcgcaatcacccccgat
gagctcaaggcacgccgcactgccctgcaagggctggaggatgcccttggcgaggcgcgt
acccgtcttgccgagcggcaacgggcgctggcgctggaggagagcaagcgggatcgctat
cgggagcaccatcccgagctagccaccctgccggatgcagagctgagtgagcagctggca
gcgctcgatgcccgttgtcgcgcccttgaagagcagctgttcgagtgcaagagcaagctg
gcacaggccgaagccgcagccctcaaggcgggcggcctgcagcaggaactggccgcccaa
caggcggtggccgaccactggcagcagctgtgcgatctgatcgggcaagccaacggcgcc
aagttccgcaccttcgcccagagtctcaccctcgagcgcctgctgctggaagccaacgcc
cagctcgccgagctgtcgccacgctaccggctggagcgggtgcccggcaccgatctggcg
ctgcaggtggtggatctcgacatgggggacgaggtgcgttcggtggactccctctccggc
ggcgagagttttctggtgtcgctggcgctggcgctggccctctccagcctctcgtcacgg
caaacccaggtcgagtcgctgtttatcgacgaagggttcggcacgctcgatccggacagt
ctggatctggcgctctccagcctcgactccctccaagccgccggtcgccagatcggggtc
atctcccacgtccagaccctggtggagcggattggcgtgcagatacgagtcgaagccctc
ggcggtggcgaaagtcgggtgcgggtcccctga
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