Aeromonas sp. CU5: CK911_12545
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Entry
CK911_12545 CDS
T05327
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
aem
Aeromonas sp. CU5
Pathway
aem03030
DNA replication
aem03430
Mismatch repair
aem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CK911_12545 (holA)
03430 Mismatch repair
CK911_12545 (holA)
03440 Homologous recombination
CK911_12545 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aem03032
]
CK911_12545 (holA)
03400 DNA repair and recombination proteins [BR:
aem03400
]
CK911_12545 (holA)
Enzymes [BR:
aem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CK911_12545 (holA)
DNA replication proteins [BR:
aem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CK911_12545 (holA)
DNA repair and recombination proteins [BR:
aem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CK911_12545 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
ATL93559
UniProt:
A0A291TK73
LinkDB
All DBs
Position
2847099..2848136
Genome browser
AA seq
345 aa
AA seq
DB search
MRIYPEQFGDHLKAGLRPCYLVFGDEPLLRLEAIDAIRQIARKQGFDERHTFVVEQGLDW
NQVYDACQAMSLFSARQIIELELPAKVDKDLAARISEIGKQLHPDLLLVLSGGRLNQTQM
KAAWFDKLYQIGTYVPVNHPEPKFFPRWMSARFQRFGLKALPDAINFMCHAYEGNLLAAS
QEIEKLTLLSPPQPISVTYLQETIIRHAHFTPFQLVDSLLEGKVNRAQRILAALRAEGTE
PGMLAWTLCRELEQLTELSLAMRSGQPLGEHFSRLRIWQSRQQLIQQALTRLPFAKLQQL
WQLMAQLDDAQRSFNTEQAWLMLQTIALGFRDSTPLPLGMESSPC
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatttatcctgaacaatttggtgaccacctcaaagcagggctcaggccctgctat
ctcgtttttggtgacgagcccctgttgcgactggaggctatcgacgccatccgtcagatc
gcccgcaaacagggtttcgatgaacgccataccttcgtggtggaacaggggctggactgg
aatcaggtctacgatgcctgtcaggccatgagcctcttctctgcccgccagatcatcgag
ctggaactgcccgccaaggtggacaaggatctggccgcccgcatcagcgaaatcggcaag
cagctccaccctgatctgctattggtactcagtggcggtcgtcttaatcaaacccagatg
aaagccgcctggttcgacaagctctaccagatcggcacctatgtgccggtcaaccatccg
gagcccaagtttttcccgcgctggatgagcgcgcgcttccagcgtttcggcctcaaggcg
ctgccggatgccatcaacttcatgtgccacgcctatgagggcaacctgctggccgccagt
caggagatcgagaagctgaccctgctctcgccgccccagcccatcagcgtcacctatctg
caagagaccatcatccgccacgcccacttcaccccattccagctggtcgattccctgctg
gaaggcaaggtgaaccgggcccagcgcattctggccgccctgcgggccgaaggcacagag
ccggggatgctggcctggaccctttgccgcgagctggagcagctgaccgagctgtcactg
gcgatgcgcagtggccagccgctgggggagcatttcagccgtctgcgtatctggcagagc
cgccagcagctgatccagcaggcgctgacccgacttccgtttgccaagttgcaacaactg
tggcaactgatggcccagctggacgatgcccagcgcagcttcaataccgaacaggcctgg
ctgatgctgcagaccattgccctcggttttcgtgatagcaccccgctgccactggggatg
gagagcagcccgtgctga
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