Aeromonas sp. CU5: CK911_12980
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Entry
CK911_12980 CDS
T05327
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
aem
Aeromonas sp. CU5
Brite
KEGG Orthology (KO) [BR:
aem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aem03016
]
CK911_12980
Enzymes [BR:
aem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CK911_12980
Transfer RNA biogenesis [BR:
aem03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CK911_12980
Prokaryotic type
CK911_12980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ATL93634
UniProt:
A0A291TK86
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All DBs
Position
complement(2947283..2948341)
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AA seq
352 aa
AA seq
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MLEQLAYLHGAPTARGILKAEAADFVVNEDLGFEPCGEGEHIFVRVRKTGENTAWVAGLL
ADAAGVNRNAVSWAGLKDRHAVTEQWFGIHLPGKAEPDLSVIESASIQILQAKRHNKKLR
VGYLKGNHFTLRLTGVSQAEALEDRLQAIATEGVPNYYGEQRFGRDGNNLEAAKAMFAGK
RIKDRNKRSLYLSAARSMLFNAIVSARIEQGLAHQLLAGDCVMLKGSHSIFSEEGVTPEL
AARLASGDVQLTAPQWGRGRLASQGAAAEFEQGVLAPYAEWCDGLEKAGLDQDRRPLLLK
PEQMSWQLDGEALTLSFFLPAGAFATSVVRELMLAEEADHGFRNQTDANSGQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgctggaacaacttgcctatctgcacggggcacccactgcccgcggtatcctcaaggct
gaggccgccgatttcgtggtgaatgaagatcttggtttcgagccctgcggggaaggggag
catatcttcgtccgggtgcgcaaaaccggcgagaacactgcctgggtggcgggtctgctg
gccgatgcggccggggtcaatcgcaatgcggtgagctgggcgggcctcaaagatcgccac
gcggtcaccgagcagtggttcggcattcacctgccgggcaaggccgaaccggacttgtca
gtcatcgagagtgccagtatccagatcctgcaagccaagcgccacaacaagaagctgcgg
gtgggttacctcaagggcaaccacttcaccctgcgcttgaccggtgtcagccaggccgag
gcgctggaagatcgcctgcaggccatcgccactgagggcgtccccaattattatggtgag
cagcggtttggccgggatggcaacaacctggaagcggccaaggcgatgttcgctggtaag
cggatcaaggatcgcaacaagcgctccctctacctctctgccgcccgcagcatgctgttc
aacgccattgttagcgctcgcatcgagcaggggctggctcatcagctgctggccggtgat
tgcgtgatgctcaagggtagccactccatcttcagtgaagagggtgtcacccctgagctg
gcggcccgcctcgcctccggcgacgtacagctcaccgcgccccagtggggtcgtggccgt
ttggccagccagggcgccgcagccgagttcgaacagggcgtgctggccccgtatgccgag
tggtgtgacgggctggagaaagccgggctggatcaggatcgccgcccgctgctgctcaag
ccggagcagatgagctggcagctggatggcgaggcgctgaccctctccttcttcctgcca
gcgggcgcgtttgccaccagcgtggtgcgcgagttaatgctggccgaagaggccgatcat
ggtttcaggaatcagaccgatgcgaattctggtcagtaa
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