Aeromonas sp. CU5: CK911_13145
Help
Entry
CK911_13145 CDS
T05327
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
aem
Aeromonas sp. CU5
Brite
KEGG Orthology (KO) [BR:
aem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aem03009
]
CK911_13145
Enzymes [BR:
aem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CK911_13145
Ribosome biogenesis [BR:
aem03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CK911_13145
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
TRM5-TYW2_MTfase
Methyltransf_11
RrnaAD
MTS
Cons_hypoth95
Methyltransf_ANTKMT
PCMT
Methyltransf_15
Methyltransf_12
Methyltransf_23
Methyltr_RsmB-F
Ubie_methyltran
Methyltransf_4
PrmA
DOT1
N6_N4_Mtase
PabTrmU54_TRAM_dom
Motif
Other DBs
NCBI-ProteinID:
ATL93664
LinkDB
All DBs
Position
complement(2980913..2982235)
Genome browser
AA seq
440 aa
AA seq
DB search
MAQFFKPQKKSTQLQRIEFTIDSLDHHCVGIGRHQGKAIFVEGALPGEVVKARITEDKKQ
YGHAALQQVVTPAANRIAPFCSHFRECGGCNAQQMSVADQQAAKAAGLVSLFERLGNIQA
PALDPVLTGEDRAYRRVCRLAIKFDKNGRCTRVGFRRRNSNDLVEIDGCPVLTAPLSALI
PPLRECLNRLKSQRELGHAELIQAEQGILMLLRHTGRPNEADRALLVAFAQAQGIDLYLQ
AADERIEALQQQFSPSYSLDGLSLAFVPGDFIQVNGPINQSMVEQALAWLGATKDDKVLD
LFCGIGNFTLPLAHQAREVVGVEGELAMVQRAEENARRNGITNARFYKADLSGDIVGMSW
AREGFDLVLLDPARPGALEVMGHVVKLSPKRVVYVSCNPVTLARDSQVLVKGGYRLVRLG
MLDMFPHTGHLESMALFERI
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtttttcaagccccaaaagaagtcaacccagctccaacgtattgaatttacg
atagacagtctggatcatcattgcgtcggtattggtcgtcaccagggtaaggcgatcttc
gttgaaggggcgctgcccggcgaggtcgtcaaggctcgcatcaccgaagacaagaaacaa
tatggccacgcggcgttgcaacaagtggtgacgcccgcggccaatcgcattgcccccttc
tgcagccacttccgcgagtgcggcggttgcaatgcccagcagatgtcagtagccgatcag
caggctgccaaggcggcgggactggtcagtctgttcgagcggttgggcaatattcaggcc
ccggcactggatccggtactgaccggtgaagatcgtgcctaccgccgggtctgtcgactg
gccatcaaatttgacaagaatggtcgctgcacccgggtcggttttcgccgtcgcaacagc
aacgatttggttgaaatcgacggctgcccggtgctgaccgcaccgctctcggcacttatc
ccgccgttgcgtgagtgcctcaaccggctcaagagccagcgcgagctgggccacgccgag
cttatccaggccgagcaggggatcttgatgctgttgcgccataccggtcgccccaatgag
gcggatcgcgccctgctggtggcgtttgcccaggctcaggggatcgacctctacctgcag
gcggccgatgagcgtatcgaagcgctgcagcaacaattttccccgtcctactcactggat
ggcctgtctcttgcatttgttcccggtgatttcattcaggtcaatggcccgatcaaccag
agcatggtggagcaggcgttggcatggctcggcgcgaccaaagatgacaaggtgctcgat
ctgttctgcggcatcggtaacttcaccttgccactggcccatcaggcccgcgaagtggtg
ggggtcgaaggtgagctggccatggtgcagcgggctgaagagaacgcccgccgcaacggc
atcaccaatgcccgtttttacaaggcggacctgagcggtgacatcgtcggcatgtcctgg
gcgcgggaagggtttgatctggtgctgctggatccggctcgccccggtgcgctggaagtg
atgggacacgtagtgaaactttcccccaagcgggtggtctatgtctcctgtaacccggtc
accctggctcgtgacagtcaggtactggtgaaagggggctaccgtctggtgcgtctgggc
atgctcgacatgttccctcacacaggtcatctggaatccatggcgctgtttgagcggatc
tag
DBGET
integrated database retrieval system
