Aeromonas sp. CU5: CK911_13655
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Entry
CK911_13655 CDS
T05327
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
aem
Aeromonas sp. CU5
Brite
KEGG Orthology (KO) [BR:
aem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aem03016
]
CK911_13655
Enzymes [BR:
aem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CK911_13655
Transfer RNA biogenesis [BR:
aem03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CK911_13655
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ATL93746
UniProt:
A0A291TKV5
LinkDB
All DBs
Position
3080218..3082254
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AA seq
678 aa
AA seq
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MFQDNPLLAQLKQQIRENIPKKEGVIRASDRGFGFLEVDEKTSYFVPPPYMKKVMHGDRV
SALIRTEKDKEVAEPDTLLEQSVTRFVARVKLFRDRLNVVADHPLIKDAIKARAKKGLDE
KEFKEGDWVVATLKRHALSDGNFSAEIIEKISAEEDHNVPWWVVLARHNLAQIEPADLPE
WKVIEEQELPRTDLTDVPFFTIDGAKTKDMDDALSIRKLDNGWELLVAIADPTAYVAEGS
ELDKEAAKRAFTVYMPGRNVPMIPRTLSDELCSLKEGEERNTLCARLLIAEDGLLLEDTE
FFAARIVSHARLNYDEVSDWAEHGKELTIDAGVMAQLPLMKAMTEARIAWRTEHALVFPD
RPDYDFELGENGEVLAIHVEPRRIANRMIEESMIAANICAGRVLGKSVGYGIFNVHTGFD
EESLDGAIELLQTAEAPFERDEIASLSGFCALRRWIDNLDTRWLDGKIRRFQSYALMSAE
PGAHYGLGLDAYATWTSPIRKYGDMVNHRLLKAVIAGKTPGERPSEELTEHLTECRRLHR
RVERDIGDWLYVRYLKAAAGTDQLFNAEIIDVMRAGLKLRLQENGAVVFMPARHILDNKD
RLECNWDNGRVYLDKTEVIYELGQVIEVKLSEAVEETRSLIAKPAVALVPGPAPEAPVAE
SAPADSSETPADAAPKAE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagacaatccgctgctggcccagctcaagcaacaaatccgcgaaaacatcccc
aagaaagagggtgtgatccgcgcctcggatcggggcttcggctttctggaggtcgatgag
aaaaccagctatttcgtcccgcctccctacatgaaaaaggtgatgcacggagaccgggtg
agcgccctgatccgcactgaaaaagacaaggaagtagctgagccggataccctgctggag
cagtcggtcacccgttttgtggcccgggtcaagctgttccgtgaccgcctcaacgtggtc
gctgatcacccgctgatcaaggatgccatcaaggcccgcgccaagaagggcctggatgag
aaagagttcaaggaaggggactgggtggttgccaccctcaagcgtcatgccctgagtgac
ggcaacttttcggccgaaatcattgagaaaatttccgccgaagaagatcacaacgtgccc
tggtgggtggtgctggcgcgccacaatctggctcaaattgaaccagcagatctgcccgaa
tggaaggtgatcgaagagcaggagctgccccgcaccgacctgaccgatgtgcctttcttc
actatcgacggcgccaagaccaaggatatggatgacgccttgtcgatccgtaaactcgac
aacggctgggagctgctggtcgctatcgccgacccgactgcctatgtagctgaaggtagc
gagctggacaaagaagccgccaagcgcgccttcaccgtctatatgccgggccgcaacgta
ccgatgatcccgcgtaccctctccgacgagctctgctccctgaaagagggtgaggaacgc
aacaccctctgcgcccgcctgctgatcgccgaagatggcctgctgctggaagataccgaa
ttcttcgctgcccgcatcgtctcccatgcccgtctcaactatgacgaggtctccgactgg
gccgagcatggcaaagaactgaccatcgacgctggcgtaatggctcagctgccgctgatg
aaagccatgaccgaggcgcgtatcgcctggcgcaccgagcacgcgctggtgttcccggat
cgtcccgactatgacttcgagctgggcgagaatggtgaagtgctggccatccacgttgag
ccacgccgcatcgccaaccggatgatcgaagagtcgatgatcgcggccaacatctgcgcc
ggtcgtgtgctgggcaagagcgtcggttacggtatcttcaacgtccacaccggtttcgat
gaagagtccctcgatggcgccatcgaactgctgcaaaccgccgaagccccgttcgagcgc
gacgaaatcgccagcctctccggtttctgtgccctgcgccgctggatcgacaacctcgac
acccgctggctggatggcaagatccgccgcttccagagctatgcgctgatgtccgccgag
cccggtgctcactacggtctgggactggatgcttacgccacctggacctcaccgatccgt
aaatatggcgacatggtcaaccatcgcctgctcaaagcggtcatcgctggcaagacgccg
ggtgagcgcccaagcgaagagctgaccgagcacctgaccgaatgccgccgcctgcaccgc
agggtcgagcgcgatatcggcgactggctctatgtccgttacctcaaggctgccgctggc
accgatcagctgttcaacgccgagatcatcgacgtgatgcgcgccggtctcaagctgcgt
ctgcaggagaacggtgccgtggtgttcatgcctgcccgccacattctcgacaacaaggat
cggctggagtgcaactgggacaacggccgcgtctatctcgacaagaccgaggttatctac
gaacttggtcaggttatcgaggtcaagctgagtgaagcggtggaagagacccgctccctc
atcgccaaaccggcggtcgcgctggtaccgggcccggcaccggaagcaccggttgccgag
agcgcaccggccgatagcagtgaaacgccagcggatgctgcccccaaggcagaataa
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